iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131450

UUCD1 version

UUC-ViV-00975

Ensembl Protein ID

VIT_15s0046g01310.t01

UniProt Accession

F6I6A3; F6I6A3_VITVI

Genbank Protein ID

CCB62499.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596755

Gene Name

SPA1; VIT_15s0046g01310

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_15s0046g01310	VIT_15s0046g01310.t01	VIT_15s0046g01310.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-25	88.8	935	965

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDl 30
           gH+  v+ ++f ++ +lvs+s D+t+k+WDl
   Q: 935  GHQKAVSYVKFlDSETLVSASTDNTLKLWDL 965
           8999*******744999*************8 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MDANSVARAA ELKRKGLDAP LMKSEGHYML GSPMKYVSSG GDWPKTLPHV YTNMLGGSGL 60
NRSITSFDGS EPVCTSPSSM KDPGLTVEEL TVRNYKTTNL SSVSSSNSRE GMRPRQSQWH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGCAA ATAGTGTAGC AAGGGCTGCA GAACTGAAGA GAAAAGGTCT TGATGCTCCA 60
TTGATGAAAT CAGAGGGTCA CTATATGTTA GGATCACCAA TGAAGTACGT ATCTAGTGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011009--Kinase-like_dom
IPR000719--Prot_kinase_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50011--PROTEIN_KINASE_DOM
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00220--S_TKc
SM00320--WD40

Gene Ontology

GO:0016604--C:nuclear body
GO:0005524--F:ATP binding
GO:0004672--F:protein kinase activity
GO:0009658--P:chloroplast organization
GO:0010100--P:negative regulation of photomorphogenesis
GO:0009640--P:photomorphogenesis
GO:0010017--P:red or far-red light signaling pathway
GO:2000028--P:regulation of photoperiodism, flowering
GO:0009637--P:response to blue light
GO:0010218--P:response to far red light
GO:0010114--P:response to red light
GO:0048575--P:short-day photoperiodism, flowering

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000403	Aegilops tauschii	54.51	0.00e+00	848.00
IUUC-Atr-002506	Amborella trichopoda	46.80	0.00e+00	812.00
IUUC-Aly-005520	Arabidopsis lyrata	49.65	0.00e+00	885.00
IUUC-Ath-007297	Arabidopsis thaliana	49.51	0.00e+00	853.00
IUUC-Bdi-014698	Brachypodium distachyon	54.75	0.00e+00	832.00
IUUC-Bol-015589	Brassica oleracea	55.77	0.00e+00	784.00
IUUC-Bra-016642	Brassica rapa	46.21	0.00e+00	814.00
IUUC-Gma-044005	Glycine max	47.69	0.00e+00	900.00
IUUC-Hvu-047750	Hordeum vulgare	55.24	0.00e+00	850.00
IUUC-Lpe-051349	Leersia perrieri	53.82	0.00e+00	833.00
IUUC-Mtr-058593	Medicago truncatula	50.00	0.00e+00	870.00
IUUC-Mac-064712	Musa acuminata	47.61	0.00e+00	839.00
IUUC-Oba-075097	Oryza barthii	47.32	0.00e+00	674.00
IUUC-Obr-076441	Oryza brachyantha	53.90	0.00e+00	833.00
IUUC-Ogl-077669	Oryza glaberrima	54.18	0.00e+00	832.00
IUUC-Ogu-078009	Oryza glumaepatula	43.40	0.00e+00	674.00
IUUC-Oin-079775	Oryza indica	54.18	0.00e+00	833.00
IUUC-Olo-080230	Oryza longistaminata	46.69	0.00e+00	666.00
IUUC-Ome-081669	Oryza meridionalis	47.07	0.00e+00	670.00
IUUC-Oni-082065	Oryza nivara	47.32	0.00e+00	676.00
IUUC-Opu-083153	Oryza punctata	47.47	0.00e+00	681.00
IUUC-Oru-084928	Oryza rufipogon	47.32	0.00e+00	672.00
IUUC-Osa-085875	Oryza sativa	54.18	0.00e+00	830.00
IUUC-Ppa-096019	Physcomitrella patens	44.44	0.00e+00	676.00
IUUC-Pop-099610	Populus trichocarpa	53.62	0.00e+00	997.00
IUUC-Ppe-101782	Prunus persica	52.97	0.00e+00	1049.00
IUUC-Smo-109020	Selaginella moellendorffii	53.75	0.00e+00	652.00
IUUC-Sit-110269	Setaria italica	54.51	0.00e+00	851.00
IUUC-Sly-111623	Solanum lycopersicum	50.76	0.00e+00	926.00
IUUC-Stu-112382	Solanum tuberosum	50.57	0.00e+00	924.00
IUUC-Sbi-114133	Sorghum bicolor	54.60	0.00e+00	832.00
IUUC-Tca-121762	Theobroma cacao	52.58	0.00e+00	1012.00
IUUC-Tae-125637	Triticum aestivum	54.70	0.00e+00	861.00
IUUC-Tur-126357	Triticum urartu	52.87	0.00e+00	806.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence