iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007110

UUCD1 version

UUC-ArT-00675

Ensembl Protein ID

AT1G04790.1

UniProt Accession

Q93XZ6; Q93XZ6_ARATH

Genbank Protein ID

AAK96689.1; AAP37763.1; AEE27744.1

Protein Name

At1g04790; Putative uncharacterized protein At1g04790; F13M7.22; RING/U-box superfamily protein

Genbank Nucleotide ID

AY054498; BT008404; CP002684

Gene Name

At1g04790; F13M7.22; F13M7_22

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT1G04790	AT1G04790.1	AT1G04790.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.30e-07	31.2	589	630

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCle +   d  + lpC H fh+dC+  w        ++ +CP+C+
   Q: 589  CVICLETPkiGDTIRHLPCLHKFHKDCIDPW------LGRSKSCPVCK 630
           ******9977554999***************......**********7 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MENSDIDMVI IPDTPDRSVH HREVKRRPHS PVAPLRYQRE EYRNHHLHGR ARPVPEIGDN 60
RESSDTRTES GHRPRASVGN ALFRRTVVEK DKGKSISTDP CAPRVEKNPV LNLNQRNGHV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGGAATAAT CTGAGGTCCA ATCGTTGCAC CCGAGCAAGA GGAGATAGAT TGTTCGATGC 60
AGTTGCTTCT CATCGAACAA CTAGGGTTTC GATTCCCACA TTTGAATCAA ATTCAATCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

ath:AT1G04790

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000237	Aegilops tauschii	60.27	3.00e-25	109.00
IUUC-Atr-002738	Amborella trichopoda	55.12	2.00e-38	153.00
IUUC-Aly-006291	Arabidopsis lyrata	85.09	0.00e+00	926.00
IUUC-Bci-013691	Botrytis cinerea	56.00	2.00e-10	60.10
IUUC-Bdi-014548	Brachypodium distachyon	60.27	3.00e-25	109.00
IUUC-Bol-015541	Brassica oleracea	63.40	5.00e-161	560.00
IUUC-Bra-017050	Brassica rapa	63.34	7.00e-162	563.00
IUUC-Cpo-021916	Cavia porcellus	34.43	4.00e-14	70.90
IUUC-Cre-022984	Chlamydomonas reinhardtii	38.10	3.00e-19	90.90
IUUC-Cme-027309	Cyanidioschyzon merolae	51.11	4.00e-11	63.20
IUUC-Dre-028405	Danio rerio	53.19	3.00e-13	68.60
IUUC-Dno-029343	Dasypus novemcinctus	40.74	4.00e-14	71.20
IUUC-Gmo-039603	Gadus morhua	39.47	1.00e-12	66.60
IUUC-Gma-043115	Glycine max	48.18	2.00e-49	189.00
IUUC-Hvu-047663	Hordeum vulgare	60.27	3.00e-25	109.00
IUUC-Lpe-051616	Leersia perrieri	63.01	2.00e-27	117.00
IUUC-Loc-052044	Lepisosteus oculatus	37.50	7.00e-13	67.40
IUUC-Mtr-057967	Medicago truncatula	67.19	2.00e-50	193.00
IUUC-Mac-065237	Musa acuminata	45.63	3.00e-54	206.00
IUUC-Nle-069076	Nomascus leucogenys	40.74	4.00e-14	71.20
IUUC-Oan-073414	Ornithorhynchus anatinus	40.96	3.00e-14	71.20
IUUC-Ocu-074881	Oryctolagus cuniculus	37.21	9.00e-15	74.70
IUUC-Oba-075723	Oryza barthii	61.64	1.00e-25	110.00
IUUC-Obr-076746	Oryza brachyantha	64.38	1.00e-27	117.00
IUUC-Ogl-076935	Oryza glaberrima	61.64	1.00e-25	110.00
IUUC-Ogu-077982	Oryza glumaepatula	61.64	1.00e-25	110.00
IUUC-Oin-079124	Oryza indica	61.64	1.00e-25	110.00
IUUC-Ome-081694	Oryza meridionalis	61.64	2.00e-25	110.00
IUUC-Oni-082353	Oryza nivara	61.64	1.00e-25	110.00
IUUC-Opu-083242	Oryza punctata	63.01	2.00e-27	117.00
IUUC-Oru-085078	Oryza rufipogon	61.64	1.00e-25	110.00
IUUC-Osa-086131	Oryza sativa	61.64	1.00e-25	110.00
IUUC-Ola-086771	Oryzias latipes	40.48	2.00e-14	72.00
IUUC-Pan-092392	Papio anubis	40.96	8.00e-14	72.80
IUUC-Pma-094718	Petromyzon marinus	39.29	9.00e-14	70.10
IUUC-Ppa-095697	Physcomitrella patens	35.42	7.00e-36	145.00
IUUC-Pop-099565	Populus trichocarpa	38.73	4.00e-73	268.00
IUUC-Ppe-101581	Prunus persica	31.70	4.00e-74	271.00
IUUC-Sha-106505	Sarcophilus harrisii	40.96	3.00e-14	71.20
IUUC-Smo-109212	Selaginella moellendorffii	52.80	1.00e-28	120.00
IUUC-Sit-110544	Setaria italica	36.36	5.00e-32	131.00
IUUC-Sly-110985	Solanum lycopersicum	34.62	5.00e-56	211.00
IUUC-Stu-112544	Solanum tuberosum	45.14	1.00e-53	204.00
IUUC-Ssc-116294	Sus scrofa	40.74	4.00e-14	71.20
IUUC-Tni-119664	Tetraodon nigroviridis	38.55	7.00e-14	70.50
IUUC-Tca-121668	Theobroma cacao	33.59	3.00e-59	223.00
IUUC-Tae-124005	Triticum aestivum	60.27	3.00e-25	109.00
IUUC-Tur-126613	Triticum urartu	60.27	3.00e-25	109.00
IUUC-Vpa-130737	Vicugna pacos	38.55	2.00e-13	68.90
IUUC-Vvi-131471	Vitis vinifera	67.94	6.00e-51	192.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence