iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131738

Ensembl Protein ID

VIT_13s0067g01000.t01

UniProt Accession

A5BFH5; A5BFH5_VITVI

Genbank Protein ID

CAN72300.1; CBI25471.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

AM457688; FN595514

Gene Name

VIT_13s0067g01000; VITISV_024922

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_13s0067g01000	VIT_13s0067g01000.t01	VIT_13s0067g01000.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.30e-08	35.4	185	234

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           + C  Cg +++ ++  + C++C++wfH +C+k++   + ++ +++ Cp+C+
   Q: 185  TLCGSCGGNYNADEFWIGCDICERWFHGKCVKIT-PAKAESIKQYKCPSCS 234
           68999*****************************.888888889******7 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MASIDSSPRT VEDIFKDYKA RRSGVVQALT FDVDEFYALC DPEKENLCLY GHPNGSWHVA 60
MPAEEVPPEL PEPALGINFA RDGMNRRDWL ALVAVHSDSW LLSVAFYFGA SLNRNDRKRL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGTAGAGCG AAAAAGAGCC CAGGCGGTGT GTCCGTACAT CTGTTGGTGC CTGGATCTCT 60
CTGTGAAAAT CTCGAGCTGG TTTCAGATCT CGAACCCTCC ATGAAATGGC TTCCATCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR021998--Alfin
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12165--Alfin
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

KEGG

vvi:100251933

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001165	Aegilops tauschii	56.88	6.00e-72	263.00
IUUC-Bdi-014258	Brachypodium distachyon	62.00	1.00e-77	281.00
IUUC-Cin-025225	Ciona intestinalis	40.35	1.00e-09	58.20
IUUC-Cne-026898	Cryptococcus neoformans	51.43	3.00e-07	50.80
IUUC-Hvu-047100	Hordeum vulgare	67.36	3.00e-80	290.00
IUUC-Lpe-050738	Leersia perrieri	71.73	7.00e-85	305.00
IUUC-Oba-075021	Oryza barthii	62.74	2.00e-76	278.00
IUUC-Ogl-077422	Oryza glaberrima	70.89	5.00e-79	286.00
IUUC-Ogu-079021	Oryza glumaepatula	62.74	2.00e-76	277.00
IUUC-Oin-079801	Oryza indica	71.31	2.00e-79	287.00
IUUC-Olo-080963	Oryza longistaminata	50.98	3.00e-34	137.00
IUUC-Ome-081881	Oryza meridionalis	70.89	5.00e-79	286.00
IUUC-Oni-082314	Oryza nivara	71.31	2.00e-79	287.00
IUUC-Opu-083359	Oryza punctata	70.46	1.00e-78	285.00
IUUC-Oru-085108	Oryza rufipogon	69.20	2.00e-75	274.00
IUUC-Pan-092346	Papio anubis	39.19	2.00e-11	63.90
IUUC-Sce-106445	Saccharomyces cerevisiae	30.16	9.00e-04	37.40
IUUC-Tae-124170	Triticum aestivum	64.00	2.00e-78	284.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence