iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099458

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Empfindlicher im dunkelroten licht 1 family protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTR_0002s20660g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s20660	POPTR_0002s20660.1	POPTR_0002s20660.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	61.24	3.00e-105	378.00	IUUC-Ath-007190

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MTETTGFSKL SDDVVLNIFS KLEDDPRNWA RLACVCTKFS SLIRDICWKS KCNKTIPSVV 60
SDLLSSPDSP FPGAWSALHK LAVCCPGLLH AGVFLEHSDF GLERELGPDD YFHKSKNTPS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACAGAAA CCACGGGTTT CTCAAAACTC TCTGACGACG TCGTACTCAA CATCTTCTCC 60
AAACTAGAAG ACGATCCACG CAACTGGGCC CGCCTCGCTT GTGTCTGCAC CAAATTCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom

Pfam

PF00646--F-box

KEGG

pop:POPTR_0002s20660g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003146	Amborella trichopoda	65.62	5.00e-71	261.00
IUUC-Aly-006192	Arabidopsis lyrata	62.73	2.00e-110	391.00
IUUC-Ath-007190	Arabidopsis thaliana	59.59	8.00e-106	376.00
IUUC-Bdi-014111	Brachypodium distachyon	68.46	7.00e-47	180.00
IUUC-Bol-015332	Brassica oleracea	60.65	8.00e-69	253.00
IUUC-Bra-017993	Brassica rapa	48.66	4.00e-95	341.00
IUUC-Ggr-039962	Gaeumannomyces graminis	30.19	2.40e-02	33.90
IUUC-Gma-044377	Glycine max	58.70	1.00e-99	355.00
IUUC-Hvu-047371	Hordeum vulgare	67.69	4.00e-53	201.00
IUUC-Lpe-051202	Leersia perrieri	64.89	2.00e-51	195.00
IUUC-Lma-053229	Leptosphaeria maculans	30.77	4.60e-02	28.50
IUUC-Mtr-057994	Medicago truncatula	54.72	3.00e-86	310.00
IUUC-Mac-065238	Musa acuminata	57.80	5.00e-100	357.00
IUUC-Obr-076134	Oryza brachyantha	61.45	1.00e-30	123.00
IUUC-Ogu-078015	Oryza glumaepatula	67.18	1.00e-53	201.00
IUUC-Oin-079518	Oryza indica	47.06	5.00e-13	67.40
IUUC-Ome-081208	Oryza meridionalis	67.18	5.00e-53	200.00
IUUC-Oni-082680	Oryza nivara	67.18	6.00e-53	200.00
IUUC-Opu-084169	Oryza punctata	66.41	1.00e-52	199.00
IUUC-Oru-084629	Oryza rufipogon	67.18	8.00e-53	200.00
IUUC-Osa-085886	Oryza sativa	67.18	8.00e-53	200.00
IUUC-Ppa-095180	Physcomitrella patens	67.97	3.00e-51	195.00
IUUC-Ppe-101460	Prunus persica	68.63	5.00e-126	443.00
IUUC-Smo-108886	Selaginella moellendorffii	60.74	4.00e-44	171.00
IUUC-Sit-110679	Setaria italica	65.44	2.00e-52	199.00
IUUC-Sly-111323	Solanum lycopersicum	68.14	2.00e-114	405.00
IUUC-Stu-112407	Solanum tuberosum	66.15	3.00e-110	390.00
IUUC-Sbi-113782	Sorghum bicolor	66.18	2.00e-54	205.00
IUUC-Tca-121453	Theobroma cacao	65.97	2.00e-114	404.00
IUUC-Tae-123170	Triticum aestivum	68.46	6.00e-54	204.00
IUUC-Vvi-131404	Vitis vinifera	67.99	2.00e-128	451.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence