iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002932

Ensembl Protein ID

ERM98487

UniProt Accession

W1NRI5; W1NRI5_AMBTC

Genbank Protein ID

ERM98487.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

KI395332

Gene Name

AMTR_s00072p00171260

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00072p00171260	ERM98487	ERM98487

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.70e-34	116.5	245	317

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+CpIslelMrdPv++++G+ty++s+I+kwl+ g++tcP+t+q l ++ l+Pn++lr+li +wce n++
   Q: 245  IPDDFRCPISLELMRDPVIVATGQTYEQSCIQKWLDAGHQTCPKTQQMLPHTVLTPNYVLRSLIAQWCENNGV 317
           89*******************************************************************9986 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MGSEEGEDIV QSLIDLVKEI SELPEWRNPW RKQYYNLVRR VKLLGPLFEE LKESSETLND 60
ESVTAFVSLK NSLLSAEELL RFWHEGSKLY QALEREDIMN KFNEVTAQLE QALNGISYDK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGAGCG AAGAAGGAGA AGATATAGTG CAGTCTTTGA TTGATTTGGT TAAGGAGATC 60
TCAGAGCTTC CAGAATGGAG AAATCCATGG AGGAAACAGT ATTACAATCT GGTGAGGAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000439	Aegilops tauschii	62.76	6.00e-175	605.00
IUUC-Aly-006103	Arabidopsis lyrata	61.40	0.00e+00	719.00
IUUC-Ath-006994	Arabidopsis thaliana	61.24	0.00e+00	717.00
IUUC-Bdi-014691	Brachypodium distachyon	63.38	0.00e+00	677.00
IUUC-Bol-015254	Brassica oleracea	59.13	0.00e+00	694.00
IUUC-Bra-016727	Brassica rapa	61.16	0.00e+00	708.00
IUUC-Gma-043634	Glycine max	67.69	0.00e+00	821.00
IUUC-Hvu-047272	Hordeum vulgare	62.24	0.00e+00	644.00
IUUC-Lpe-051517	Leersia perrieri	63.06	0.00e+00	649.00
IUUC-Mtr-057651	Medicago truncatula	67.49	0.00e+00	791.00
IUUC-Mac-065604	Musa acuminata	57.02	0.00e+00	652.00
IUUC-Oba-075750	Oryza barthii	57.62	0.00e+00	662.00
IUUC-Obr-076590	Oryza brachyantha	57.59	0.00e+00	629.00
IUUC-Ogl-077380	Oryza glaberrima	57.78	0.00e+00	663.00
IUUC-Ogu-078219	Oryza glumaepatula	57.62	0.00e+00	660.00
IUUC-Oin-079724	Oryza indica	58.47	0.00e+00	683.00
IUUC-Olo-081001	Oryza longistaminata	58.07	0.00e+00	639.00
IUUC-Ome-081932	Oryza meridionalis	58.02	0.00e+00	663.00
IUUC-Oni-082439	Oryza nivara	57.78	0.00e+00	663.00
IUUC-Opu-083837	Oryza punctata	58.14	0.00e+00	682.00
IUUC-Oru-085172	Oryza rufipogon	57.78	0.00e+00	659.00
IUUC-Osa-085991	Oryza sativa	57.64	0.00e+00	659.00
IUUC-Ppa-095383	Physcomitrella patens	52.27	3.00e-176	610.00
IUUC-Pop-098912	Populus trichocarpa	69.51	0.00e+00	835.00
IUUC-Ppe-102057	Prunus persica	68.11	0.00e+00	689.00
IUUC-Pyt-104569	Pyrenophora triticirepentis	31.91	7.00e-15	74.30
IUUC-Smo-109340	Selaginella moellendorffii	54.55	2.00e-172	598.00
IUUC-Sit-110392	Setaria italica	58.91	3.00e-178	617.00
IUUC-Sly-111662	Solanum lycopersicum	68.45	0.00e+00	809.00
IUUC-Stu-111979	Solanum tuberosum	68.61	0.00e+00	810.00
IUUC-Sbi-114550	Sorghum bicolor	58.31	0.00e+00	674.00
IUUC-Tca-121269	Theobroma cacao	70.39	0.00e+00	830.00
IUUC-Tae-124061	Triticum aestivum	59.17	0.00e+00	658.00
IUUC-Tur-126448	Triticum urartu	61.57	3.00e-179	620.00
IUUC-Vvi-131729	Vitis vinifera	72.09	0.00e+00	842.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence