iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080320

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN539498.1_FG003	KN539498.1_FGT003	KN539498.1_FGP003

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-36	125.3	224	296

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p+ef+CpIslelM+dPv+++sG+ty+rs+I+kwl+sg+ktcP+t+qpl++++l+Pn +l++li++wce+n++
   Q: 224  IPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFVLKSLISQWCEANGI 296
           79********************************************************************986 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MPKRVADEIA ALPEPRGPLR RPCADLSRRV RLLAPLLDHL PASSSTPLAD ALGAARDLLR 60
KTRDGSKIDQ AMRGDAFLDE FAGVNRQIHL ALDALPYNTF HMPQEVQEQV ALVHSQFQRA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGAAGC GGGTGGCCGA CGAGATCGCG GCGCTCCCGG AGCCGCGTGG GCCCCTGCGC 60
CGCCCCTGCG CCGACCTCTC CCGCCGCGTC CGCCTCCTCG CCCCGCTGCT CGACCACCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014691	Brachypodium distachyon	69.29	0.00e+00	629.00
IUUC-Hvu-047272	Hordeum vulgare	68.52	5.00e-167	580.00
IUUC-Lpe-051517	Leersia perrieri	77.67	0.00e+00	734.00
IUUC-Mac-065604	Musa acuminata	57.04	6.00e-174	603.00
IUUC-Oba-075750	Oryza barthii	82.32	0.00e+00	790.00
IUUC-Obr-076793	Oryza brachyantha	79.17	0.00e+00	686.00
IUUC-Ogl-077380	Oryza glaberrima	82.51	0.00e+00	791.00
IUUC-Ogu-078219	Oryza glumaepatula	82.28	0.00e+00	793.00
IUUC-Oin-079724	Oryza indica	85.38	0.00e+00	830.00
IUUC-Ome-081932	Oryza meridionalis	82.48	0.00e+00	794.00
IUUC-Oni-082439	Oryza nivara	82.51	0.00e+00	791.00
IUUC-Opu-083837	Oryza punctata	84.78	0.00e+00	823.00
IUUC-Oru-085172	Oryza rufipogon	82.28	0.00e+00	791.00
IUUC-Osa-085991	Oryza sativa	82.51	0.00e+00	792.00
IUUC-Ppe-101965	Prunus persica	52.26	7.00e-168	582.00
IUUC-Sit-110461	Setaria italica	65.41	1.00e-164	572.00
IUUC-Sbi-114550	Sorghum bicolor	71.63	0.00e+00	679.00
IUUC-Tae-124061	Triticum aestivum	70.79	2.00e-179	621.00
IUUC-Tur-126276	Triticum urartu	65.82	1.00e-156	545.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence