iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111662

Ensembl Protein ID

Solyc11g008390.1.1

UniProt Accession

K4D599; K4D599_SOLLC

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc11g008390.1	Solyc11g008390.1.1	Solyc11g008390.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.30e-34	117.5	245	317

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+CpIslelM+dPv++++G+ty+rs+I+kwl+ g+ktcP+t+q+l ++ l+Pn++l++li  wce+n++
   Q: 245  IPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLLHTALTPNYVLKSLIALWCESNGV 317
           89********************************************************************986 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MGHQKEELIN ELTELIDGVS GLPECRSVSK RMYSNLVRRV KLLSPLVEDL KDSDGVEVGD 60
DVVHGLELLK IALISGLELL KSVNEGSKIL QALQIENISS RFLDVTEQIE DALSHIPYNK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTCATC AGAAAGAGGA ATTAATCAAC GAGCTGACGG AGTTAATCGA TGGGGTTTCT 60
GGTTTACCGG AGTGCCGGTC AGTGTCTAAG AGGATGTACA GTAATTTGGT GAGAAGAGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sly:101244336

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002932	Amborella trichopoda	68.61	0.00e+00	806.00
IUUC-Aly-006103	Arabidopsis lyrata	66.50	0.00e+00	787.00
IUUC-Ath-006994	Arabidopsis thaliana	66.18	0.00e+00	785.00
IUUC-Bdi-014691	Brachypodium distachyon	64.94	0.00e+00	701.00
IUUC-Bol-016160	Brassica oleracea	65.18	0.00e+00	774.00
IUUC-Bra-016727	Brassica rapa	65.32	0.00e+00	770.00
IUUC-Gma-043634	Glycine max	72.33	0.00e+00	889.00
IUUC-Hvu-047272	Hordeum vulgare	64.86	0.00e+00	671.00
IUUC-Lpe-051517	Leersia perrieri	64.79	0.00e+00	675.00
IUUC-Mtr-057651	Medicago truncatula	71.94	0.00e+00	857.00
IUUC-Mac-065604	Musa acuminata	58.57	0.00e+00	646.00
IUUC-Oba-075750	Oryza barthii	63.62	0.00e+00	682.00
IUUC-Obr-076793	Oryza brachyantha	64.55	0.00e+00	662.00
IUUC-Ogl-077380	Oryza glaberrima	63.81	0.00e+00	683.00
IUUC-Ogu-078219	Oryza glumaepatula	63.43	0.00e+00	680.00
IUUC-Oin-079724	Oryza indica	60.10	0.00e+00	696.00
IUUC-Ome-081932	Oryza meridionalis	63.43	0.00e+00	681.00
IUUC-Oni-082439	Oryza nivara	63.81	0.00e+00	682.00
IUUC-Opu-083837	Oryza punctata	60.10	0.00e+00	699.00
IUUC-Oru-085172	Oryza rufipogon	63.62	0.00e+00	681.00
IUUC-Osa-085991	Oryza sativa	63.62	0.00e+00	681.00
IUUC-Pop-099229	Populus trichocarpa	74.40	0.00e+00	909.00
IUUC-Ppe-101965	Prunus persica	71.10	0.00e+00	850.00
IUUC-Smo-109340	Selaginella moellendorffii	56.69	2.00e-167	581.00
IUUC-Sit-110461	Setaria italica	67.21	0.00e+00	666.00
IUUC-Stu-111979	Solanum tuberosum	97.76	0.00e+00	1167.00
IUUC-Sbi-114550	Sorghum bicolor	60.63	0.00e+00	690.00
IUUC-Tca-121269	Theobroma cacao	76.29	0.00e+00	925.00
IUUC-Tae-124061	Triticum aestivum	63.64	0.00e+00	674.00
IUUC-Tur-126276	Triticum urartu	61.97	0.00e+00	633.00
IUUC-Vvi-131729	Vitis vinifera	76.86	0.00e+00	919.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence