iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005518

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

GL348719

Gene Name

ARALYDRAFT_916253

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_703995.1	scaffold_703995.1	scaffold_703995.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.60e-16	59.7	56	122

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawcee 71
           e+p+eflCpIs+ lM+dP +++sG++y+r+++        kt  +t  p  + +  +Pnl+l++ i +wce+
   Q: 56   EIPAEFLCPISGSLMSDPIIVSSGHSYERACVIA-----SKTLGFTPNPPPDFSTvIPNLALKSAILSWCER 122
           69******************************43.....45578998888777766**************97 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MEIQRPVINL MVLHSQHDKS DNLSRRESLA GKSKWRISLS RSSSSSSSNN SPTKTEIPAE 60
FLCPISGSLM SDPIIVSSGH SYERACVIAS KTLGFTPNPP PDFSTVIPNL ALKSAILSWC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTGAAAAAT CCAATCTTTA ATGGAGATTC AACGACCAGT TATCAATCTC ATGGTTCTTC 60
ACTCACAACA CGATAAAAGT GACAACCTTT CCCGACGAGA ATCTCTCGCC GGTAAATCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

aly:ARALYDRAFT_916253

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003157	Amborella trichopoda	43.89	8.00e-67	247.00
IUUC-Ath-006703	Arabidopsis thaliana	95.64	0.00e+00	989.00
IUUC-Bdi-014649	Brachypodium distachyon	36.25	6.00e-69	254.00
IUUC-Bol-015923	Brassica oleracea	84.96	0.00e+00	828.00
IUUC-Bra-016715	Brassica rapa	83.99	0.00e+00	777.00
IUUC-Gma-043475	Glycine max	50.72	8.00e-116	410.00
IUUC-Mac-064760	Musa acuminata	36.93	6.00e-61	227.00
IUUC-Ome-081313	Oryza meridionalis	33.26	1.00e-45	176.00
IUUC-Ppe-101810	Prunus persica	55.03	1.00e-140	492.00
IUUC-Sly-111131	Solanum lycopersicum	55.60	5.00e-138	483.00
IUUC-Stu-112864	Solanum tuberosum	56.03	1.00e-128	452.00
IUUC-Tca-121304	Theobroma cacao	62.28	2.00e-159	555.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence