iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Spo-108358

Ensembl Protein ID

SPAC343.09.1:pep

UniProt Accession

Q9UT81; UBX3_SCHPO

Genbank Protein ID

CAB52272.1

Protein Name

UBX domain-containing protein 3; Meiotically up-regulated gene 39 protein

Genbank Nucleotide ID

CU329670

Gene Name

ubx3; mug39; SPAC343.09

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SPAC343.09	SPAC343.09.1	SPAC343.09.1:pep

Annotation

mRNA Expression
GEO
Protein-protein Interaction
iRefIndex	Mentha
Post-translational Modifications (PTMs)
dbPAF	dbPTM	UniProt
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
UBD/Alpha-Helix/UBA	UBA	15120077

Classification

Family	E-value	Score	Start	End
UBD/Alpha-Helix/UBA	0.00014	20.0	1	40
ULD/UDP/UFD/UBX	1.20e-10	39.9	335	406

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 1    sededkleqlve.MGFdreealqaLraannnleaAveyLl 39
           +++ed+l ++++  ++d ++ +  L+++n+n+e A+++L+
   Q: 1    MDREDILKEFCNrNNIDVSQGRFFLESTNWNYELATALLH 40
           689***********************************97 PP

ULD/UDP/UFD/UBX

   S: 2    tteqatlqiRlpdGkrlvrkFpssttleqiyqfveyllvessdpFeLvspfPrrtlkpeehmstlqeagLvpsgsl 77
           +++++++q+Rl++G r v + + s+tl++iy+ v      s  +F L  pfP +tl+++ +  t + a L + + +
   Q: 335  NKPTTRIQVRLSNGGRTVLTVNLSHTLHDIYEAVR---AVSPGNFILSVPFPAKTLEDDPSV-TVEAASLKNASLV 406
           6789*******************************...888999***************994.7787777776655 PP

Organism

Schizosaccharomyces pombe

Functional Description
(View)

Involved in CDC48-dependent protein degradation through the ubiquitin/proteasome pathway. Involved in delivery of substrates to the 26S proteasome. Also required for membrane fusion and sporulation.

Protein Sequence
(Fasta)

MDREDILKEF CNRNNIDVSQ GRFFLESTNW NYELATALLH EVIPPEEDHG LQPSSDVSKV 60
PEVTGSSSGI SGGDQQPPRP LQRQQNTQGQ GMKSGTASKK FATLRDLEGN DESAEEKSHL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACGAAACGT TTGGGTCGTA TATTTGTTAC TTAACTTATT TAGCAAGATT CTCTTTATTA 60
GATGAACGTG AAATTTACCA ACTACAAGCA GTTACCAACA AAGGATATTT ACAGCTATTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0469--Meiosis
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0749--Sporulation
KW-0833--Ubl conjugation pathway

Interpro

IPR012989--SEP_domain
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR001012--UBX_dom

PROSITE

PS51399--SEP
PS50033--UBX

Pfam

PF08059--SEP
PF00789--UBX

SMART

SM00553--SEP
SM00166--UBX

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0043130--F:ubiquitin binding
GO:0007030--P:Golgi organization
GO:0051321--P:meiotic cell cycle
GO:0061025--P:membrane fusion
GO:0031468--P:nuclear envelope reassembly
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0030435--P:sporulation resulting in formation of a cellular spore

KEGG

spo:SPAC343.09

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000550	Aegilops tauschii	34.34	4.00e-25	105.00
IUUC-Aml-001919	Ailuropoda melanoleuca	28.87	1.00e-34	138.00
IUUC-Atr-002543	Amborella trichopoda	29.67	6.00e-32	129.00
IUUC-Apl-003388	Anas platyrhynchos	29.56	1.00e-33	134.00
IUUC-Aca-005210	Anolis carolinensis	29.48	2.00e-34	137.00
IUUC-Aly-006329	Arabidopsis lyrata	34.45	2.00e-27	113.00
IUUC-Ath-007369	Arabidopsis thaliana	35.12	6.00e-28	115.00
IUUC-Ago-007933	Ashbya gossypii	29.62	2.00e-26	110.00
IUUC-Acl-008176	Aspergillus clavatus	30.43	2.00e-34	137.00
IUUC-Afl-008553	Aspergillus flavus	32.19	2.00e-26	111.00
IUUC-Afu-008919	Aspergillus fumigatus	35.02	1.00e-33	135.00
IUUC-Ani-009398	Aspergillus nidulans	35.67	7.00e-37	145.00
IUUC-Ang-009594	Aspergillus niger	30.29	1.00e-33	135.00
IUUC-Aor-010016	Aspergillus oryzae	33.12	1.00e-27	115.00
IUUC-Ate-010455	Aspergillus terreus	34.90	2.00e-35	141.00
IUUC-Ame-011089	Astyanax mexicanus	29.48	3.00e-38	150.00
IUUC-Bgr-012256	Blumeria graminis	29.33	6.00e-31	126.00
IUUC-Bta-012898	Bos taurus	29.25	6.00e-36	142.00
IUUC-Bci-013750	Botrytis cinerea	34.78	9.00e-36	142.00
IUUC-Bdi-014746	Brachypodium distachyon	32.34	6.00e-30	122.00
IUUC-Bol-016465	Brassica oleracea	33.33	1.00e-26	111.00
IUUC-Bra-017055	Brassica rapa	33.33	2.00e-26	110.00
IUUC-Cel-018169	Caenorhabditis elegans	31.90	8.00e-18	82.00
IUUC-Cja-018993	Callithrix jacchus	29.11	6.00e-37	145.00
IUUC-Cfa-020958	Canis familiaris	29.48	4.00e-37	146.00
IUUC-Cpo-021417	Cavia porcellus	29.72	1.00e-35	142.00
IUUC-Cre-022692	Chlamydomonas reinhardtii	30.77	6.20e-01	26.60
IUUC-Csa-023244	Chlorocebus sabaeus	29.48	4.00e-37	146.00
IUUC-Cho-024683	Choloepus hoffmanni	32.11	1.00e-14	71.20
IUUC-Cin-025686	Ciona intestinalis	27.62	2.00e-27	114.00
IUUC-Csv-025945	Ciona savignyi	26.60	4.00e-27	113.00
IUUC-Cgl-026628	Colletotrichum gloeosporioides	33.33	4.00e-23	100.00
IUUC-Cne-026798	Cryptococcus neoformans	40.74	1.00e-37	149.00
IUUC-Cme-027347	Cyanidioschyzon merolae	30.37	1.00e-26	111.00
IUUC-Dre-028748	Danio rerio	29.15	4.00e-34	136.00
IUUC-Dno-029977	Dasypus novemcinctus	28.64	2.00e-36	144.00
IUUC-Dor-030203	Dipodomys ordii	30.82	2.00e-31	127.00
IUUC-Dse-031256	Dothistroma septosporum	33.84	6.00e-36	142.00
IUUC-Dme-031878	Drosophila melanogaster	31.35	6.00e-26	109.00
IUUC-Ete-032997	Echinops telfairi	29.58	4.00e-36	143.00
IUUC-Eca-034132	Equus caballus	31.56	1.00e-31	128.00
IUUC-Eeu-035097	Erinaceus europaeus	44.12	7.00e-05	39.70
IUUC-Fca-036037	Felis catus	31.15	8.00e-32	129.00
IUUC-Fal-037100	Ficedula albicollis	30.30	2.00e-31	127.00
IUUC-Fox-037690	Fusarium oxysporum	54.05	1.00e-04	37.40
IUUC-Fso-038190	Fusarium solani	36.21	1.00e-33	135.00
IUUC-Gmo-039429	Gadus morhua	29.59	5.00e-33	132.00
IUUC-Ggr-039971	Gaeumannomyces graminis	26.41	3.00e-14	71.20
IUUC-Gga-040864	Gallus gallus	30.19	9.00e-38	148.00
IUUC-Gac-041589	Gasterosteus aculeatus	28.98	3.00e-35	140.00
IUUC-Gma-044294	Glycine max	28.87	1.00e-28	118.00
IUUC-Ggo-044601	Gorilla gorilla	29.34	1.00e-37	148.00
IUUC-Hsa-045773	Homo sapiens	29.95	5.00e-37	146.00
IUUC-Hvu-047203	Hordeum vulgare	29.72	2.00e-20	90.10
IUUC-Itr-047949	Ictidomys tridecemlineatus	28.64	1.00e-36	144.00
IUUC-Kpa-049322	Komagataella pastoris	31.77	7.00e-26	108.00
IUUC-Lch-050161	Latimeria chalumnae	32.21	8.00e-30	122.00
IUUC-Lpe-051122	Leersia perrieri	28.28	2.00e-23	101.00
IUUC-Loc-052555	Lepisosteus oculatus	28.07	2.00e-36	144.00
IUUC-Lma-053319	Leptosphaeria maculans	27.56	7.00e-33	132.00
IUUC-Laf-054237	Loxodonta africana	28.40	8.00e-36	142.00
IUUC-Mcc-055472	Macaca mulatta	29.34	1.00e-37	148.00
IUUC-Meu-056093	Macropus eugenii	35.81	9.00e-23	98.60
IUUC-Mor-057220	Magnaporthe oryzae	30.05	9.00e-38	149.00
IUUC-Mpo-057595	Magnaporthe poae	25.85	9.00e-18	82.40
IUUC-Mtr-058376	Medicago truncatula	31.08	8.00e-25	105.00
IUUC-Mla-059077	Melampsora laricipopulina	30.94	2.00e-31	128.00
IUUC-Mga-059836	Meleagris gallopavo	32.02	2.00e-32	131.00
IUUC-Mvi-060292	Microbotryum violaceum	34.64	2.00e-37	148.00
IUUC-Mmr-060897	Microcebus murinus	28.64	5.00e-36	142.00
IUUC-Mdo-062066	Monodelphis domestica	29.95	2.00e-35	141.00
IUUC-Mmu-063686	Mus musculus	28.64	6.00e-36	142.00
IUUC-Mac-065403	Musa acuminata	30.85	7.00e-25	106.00
IUUC-Mpu-065688	Mustela putorius furo	29.25	1.00e-36	144.00
IUUC-Mlu-067566	Myotis lucifugus	27.73	1.00e-33	134.00
IUUC-Nfi-068609	Neosartorya fischeri	35.02	2.00e-33	134.00
IUUC-Ncr-068786	Neurospora crassa	31.05	1.00e-28	118.00
IUUC-Nle-069169	Nomascus leucogenys	31.89	4.00e-32	129.00
IUUC-Opr-070979	Ochotona princeps	31.58	5.00e-32	129.00
IUUC-Ont-071803	Oreochromis niloticus	29.62	5.00e-36	143.00
IUUC-Oan-073007	Ornithorhynchus anatinus	28.16	2.00e-26	110.00
IUUC-Ocu-074276	Oryctolagus cuniculus	29.48	1.00e-36	145.00
IUUC-Oba-075011	Oryza barthii	31.56	3.00e-26	110.00
IUUC-Obr-076164	Oryza brachyantha	29.87	4.00e-20	89.40
IUUC-Ogl-077805	Oryza glaberrima	31.56	3.00e-26	110.00
IUUC-Ogu-078942	Oryza glumaepatula	31.23	2.00e-26	110.00
IUUC-Oin-079497	Oryza indica	34.67	4.00e-23	99.80
IUUC-Olo-080254	Oryza longistaminata	34.17	4.00e-23	100.00
IUUC-Ome-081766	Oryza meridionalis	28.33	3.00e-20	92.00
IUUC-Oni-082258	Oryza nivara	31.56	3.00e-26	110.00
IUUC-Opu-083331	Oryza punctata	32.55	2.00e-22	99.40
IUUC-Oru-084748	Oryza rufipogon	31.23	2.00e-26	110.00
IUUC-Osa-085359	Oryza sativa	31.56	3.00e-26	110.00
IUUC-Ola-086761	Oryzias latipes	29.86	2.00e-36	144.00
IUUC-Olu-087598	Ostreococcus lucimarinus	33.66	5.00e-21	92.80
IUUC-Oga-088533	Otolemur garnettii	29.01	2.00e-35	141.00
IUUC-Oar-089450	Ovis aries	29.25	6.00e-36	142.00
IUUC-Ptr-090926	Pan troglodytes	29.95	5.00e-37	146.00
IUUC-Pan-092100	Papio anubis	29.95	4.00e-37	146.00
IUUC-Psi-093486	Pelodiscus sinensis	28.47	9.00e-28	115.00
IUUC-Pma-094475	Petromyzon marinus	30.82	2.00e-29	120.00
IUUC-Pno-094769	Phaeosphaeria nodorum	36.21	5.00e-39	153.00
IUUC-Ppa-095833	Physcomitrella patens	29.37	9.00e-31	125.00
IUUC-Pfo-096193	Poecilia formosa	29.69	3.00e-34	137.00
IUUC-Pab-097971	Pongo abelii	29.95	5.00e-37	146.00
IUUC-Pop-098970	Populus trichocarpa	31.80	2.00e-28	118.00
IUUC-Pca-100390	Procavia capensis	29.19	5.00e-16	75.90
IUUC-Ppe-101417	Prunus persica	29.79	4.00e-25	107.00
IUUC-Pva-102504	Pteropus vampyrus	31.15	4.00e-32	130.00
IUUC-Pgr-103447	Puccinia graminis	26.61	4.00e-32	130.00
IUUC-Ptt-103729	Puccinia triticina	32.73	3.00e-35	140.00
IUUC-Pte-104083	Pyrenophora teres	32.94	2.00e-37	147.00
IUUC-Pyt-104504	Pyrenophora triticirepentis	33.11	2.00e-34	138.00
IUUC-Rno-105448	Rattus norvegicus	28.77	4.00e-35	140.00
IUUC-Sce-106457	Saccharomyces cerevisiae	35.87	5.00e-37	146.00
IUUC-Sha-106777	Sarcophilus harrisii	29.37	2.00e-08	50.40
IUUC-Sja-107717	Schizosaccharomyces japonicus	45.67	2.00e-83	300.00
IUUC-Smo-109535	Selaginella moellendorffii	32.72	1.00e-25	108.00
IUUC-Sit-110328	Setaria italica	33.44	2.00e-28	118.00
IUUC-Sly-111135	Solanum lycopersicum	32.91	9.00e-29	119.00
IUUC-Stu-112733	Solanum tuberosum	32.59	3.00e-28	117.00
IUUC-Sar-113445	Sorex araneus	29.51	2.00e-15	73.90
IUUC-Sbi-114761	Sorghum bicolor	33.22	3.00e-30	123.00
IUUC-Sre-115176	Sporisorium reilianum	36.50	7.00e-30	122.00
IUUC-Ssc-116008	Sus scrofa	29.72	1.00e-36	145.00
IUUC-Tgu-117238	Taeniopygia guttata	29.79	9.00e-38	148.00
IUUC-Tru-118521	Takifugu rubripes	28.98	3.00e-35	140.00
IUUC-Tsy-119015	Tarsius syrichta	32.00	1.00e-24	105.00
IUUC-Tni-119705	Tetraodon nigroviridis	30.33	1.00e-36	145.00
IUUC-Tca-121370	Theobroma cacao	30.41	2.00e-18	85.10
IUUC-Tre-121941	Trichoderma reesei	31.42	6.00e-27	112.00
IUUC-Tvi-122602	Trichoderma virens	32.77	3.00e-27	114.00
IUUC-Tae-123686	Triticum aestivum	30.79	4.00e-26	109.00
IUUC-Tur-126267	Triticum urartu	33.01	3.00e-22	96.70
IUUC-Tme-127193	Tuber melanosporum	36.02	4.00e-46	176.00
IUUC-Tbe-127716	Tupaia belangeri	30.92	4.00e-31	126.00
IUUC-Ttr-128262	Tursiops truncatus	28.97	7.00e-36	142.00
IUUC-Uma-129600	Ustilago maydis	28.29	2.00e-33	134.00
IUUC-Vda-129743	Verticillium dahliae	34.68	1.00e-30	125.00
IUUC-Vpa-130068	Vicugna pacos	30.18	7.00e-27	112.00
IUUC-Vvi-131338	Vitis vinifera	31.37	5.00e-23	99.80
IUUC-Xtr-132381	Xenopus tropicalis	30.50	7.00e-20	88.60
IUUC-Xma-133944	Xiphophorus maculatus	29.93	3.00e-34	137.00
IUUC-Yli-134604	Yarrowia lipolytica	32.91	1.00e-29	122.00
IUUC-Zma-135978	Zea mays	33.44	2.00e-27	114.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence