iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-042920

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000847

Gene Name

LOC100820594; GLYMA_14G105700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA14G12360	GLYMA14G12360.1	GLYMA14G12360.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.10e-74	252.3	183	488

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaq 93
           +Gl N gN+C+ N vLQcLs++++l  +lle  +++++     + ++ ++l+++++ +e     +++a+sp ++l+ l ++   +   +q+Da+
   Q: 183  CGLLNCGNSCFANVVLQCLSFTKPLVAYLLEkGHRREC-----SCNDWCFLCEFENHVERT-RLSSQAFSPMNILSRLPNIGGTLGYGRQEDAH 270
           7******************************4344444.....46678**********999.88999*************************** PP
   S: 94   EflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkesl 187
           Ef++f +d++++ +         +e++ +       +   ++ ++++li+++F+g+l+s+++c +c+++s+++e+++dl+++++g+      sl
   Q: 271  EFMRFSIDTMQSVC--------LDEFGGE-------KAVPPNLQETTLIQHIFGGRLQSEVICTKCNKISNQYENMMDLTVEIHGDAA----SL 345
           **************........3444444.......7889999********************************************6....8* PP
   S: 188  qdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLi 281
           ++cL++ft++e+l+gen+y+ce ck++++a k+l++k  P++L++ LkRf    + ++  k+nk+++fp++L+lsp++++  ++   +++Y+L+
   Q: 346  EECLDQFTARERLDGENMYKCEGCKDYVKAWKRLTVKCAPNILTIALKRF----QSGRFGKLNKRISFPETLNLSPYMSEAGDG---SDIYKLY 432
           **************************************************....346668********************7766...79***** PP
   S: 282  avvvHsGslss...GHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           +vvvH   l+    GHY++y+k+ +g+W+++dD kV +v+ eevl+   + aY+l+Y r
   Q: 433  GVVVHIDMLNAsffGHYICYIKDFQGNWYRIDDWKVMTVEVEEVLS---QGAYMLLYSR 488
           ******95554455********************************...********87 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MLVAVGASWD LNWFLQLLLS VIVVAIGVHY FVKVTASKYF LVDANFEGDH HHALATDAMP 60
GALAAADPLC AVCATPAPKK CSRCKAVRYC SQACQQSHWM SGHKTVCKDF RETSARSSAQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTTAAAGTA TGACATTAAA GGAAAGTGAG AAGAAAAAAA ATACTGTTAT CTTATATTAT 60
CATATAGTAG TATCATATAT TATATTATAT TACTACATAA TATTATAATT ATATAATATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

gmx:100820594

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005942	Arabidopsis lyrata	64.09	1.00e-178	619.00
IUUC-Ath-007334	Arabidopsis thaliana	64.68	0.00e+00	677.00
IUUC-Mtr-057748	Medicago truncatula	78.78	0.00e+00	929.00
IUUC-Mac-065204	Musa acuminata	61.30	7.00e-177	613.00
IUUC-Oba-075131	Oryza barthii	54.55	6.00e-156	545.00
IUUC-Ogl-077264	Oryza glaberrima	55.10	6.00e-167	581.00
IUUC-Ogu-078646	Oryza glumaepatula	55.28	7.00e-167	581.00
IUUC-Oin-079613	Oryza indica	53.31	2.00e-155	543.00
IUUC-Olo-080250	Oryza longistaminata	54.58	4.00e-166	578.00
IUUC-Ome-081416	Oryza meridionalis	55.10	4.00e-166	578.00
IUUC-Oni-082102	Oryza nivara	55.10	9.00e-166	577.00
IUUC-Oru-084644	Oryza rufipogon	55.28	9.00e-167	581.00
IUUC-Osa-086195	Oryza sativa	54.83	6.00e-158	551.00
IUUC-Ppe-101845	Prunus persica	72.04	0.00e+00	682.00
IUUC-Sit-109798	Setaria italica	53.70	4.00e-168	585.00
IUUC-Sbi-113982	Sorghum bicolor	62.83	4.00e-165	575.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence