iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-006998

Ensembl Protein ID

AT1G04390.1

UniProt Accession

P93820; F4I487; Q0WQI5; Y1439_ARATH

Genbank Protein ID

AAB70453.1; AEE27691.2; BAF00614.1

Protein Name

BTB/POZ domain-containing protein At1g04390

Genbank Nucleotide ID

AC000104; CP002684; AK228712

Gene Name

At1g04390; F19P19.16

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT1G04390	AT1G04390.1	AT1G04390.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
PINA	HINT
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/BCR/BTB_Other: BTB	4.80e-06	27.7	833	887

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/BCR/BTB_Other: BTB

   S: 11   effahkivLaasSsvFyalflmeleesksklmveikdvqpevfrallkFlYtgklde 67
           + + h+++L++ +++++alf +++ es+  ++ ++  v+   +  l++  Y+++l+ 
   Q: 833  HAHSHRVILSSGCEYLRALFRSGMQESH-LDRLNVP-VSWLGLTKLVSWFYSDELPK 887
           7789***********************9.*******.***************99986 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

Protein Sequence
(Fasta)

MASSKGGNTT AHINTLHHRL YHALNLGFRV CDEKEKKWKC TDIEIQRHVV KSISAFLDCF 60
SRATANNRLI KDSISDIAGA LVFILGSKNR AVVGLAANVV IRLIRIVPPS ILHSYSLDLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACGGTCTCT CTGTGTCGTG TATCAATCAC TCCGTTGTAT CAAATCCACC GGTCAATTTT 60
CAGTCAGAAC GAAAACTCCG GCGACAGATA TGGCGTCGTC AAAGGGAGGA AACACCACTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0025--Alternative splicing
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0833--Ubl conjugation pathway

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000210--BTB/POZ_dom
IPR011333--SKP1/BTB/POZ

PROSITE

PS50097--BTB

Pfam

PF00651--BTB

Gene Ontology

GO:0016567--P:protein ubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000946	Aegilops tauschii	39.17	4.00e-67	249.00
IUUC-Atr-002690	Amborella trichopoda	32.44	3.00e-134	472.00
IUUC-Ago-007793	Ashbya gossypii	28.95	2.20e-02	33.50
IUUC-Bdi-014792	Brachypodium distachyon	39.14	4.00e-72	265.00
IUUC-Bol-016389	Brassica oleracea	83.86	0.00e+00	1594.00
IUUC-Bra-017768	Brassica rapa	84.93	0.00e+00	760.00
IUUC-Gma-042891	Glycine max	44.10	0.00e+00	795.00
IUUC-Hvu-047081	Hordeum vulgare	32.61	9.00e-134	470.00
IUUC-Mtr-058631	Medicago truncatula	44.17	0.00e+00	783.00
IUUC-Mac-065668	Musa acuminata	41.38	1.00e-77	284.00
IUUC-Oba-075291	Oryza barthii	39.00	2.00e-63	237.00
IUUC-Obr-076380	Oryza brachyantha	33.20	2.00e-126	446.00
IUUC-Ogu-078995	Oryza glumaepatula	41.81	1.00e-40	158.00
IUUC-Oin-079506	Oryza indica	33.84	3.00e-135	475.00
IUUC-Olo-080237	Oryza longistaminata	40.56	2.00e-73	270.00
IUUC-Ome-081473	Oryza meridionalis	33.16	4.00e-130	458.00
IUUC-Oni-082347	Oryza nivara	32.83	1.00e-123	437.00
IUUC-Opu-083552	Oryza punctata	33.23	5.00e-134	471.00
IUUC-Oru-085118	Oryza rufipogon	40.00	1.00e-69	257.00
IUUC-Ppa-095750	Physcomitrella patens	25.35	2.00e-62	233.00
IUUC-Pgr-103333	Puccinia graminis	44.44	9.30e-01	28.10
IUUC-Ptt-103702	Puccinia triticina	44.44	2.80e+00	26.60
IUUC-Sly-110935	Solanum lycopersicum	42.81	6.00e-137	481.00
IUUC-Stu-112463	Solanum tuberosum	43.73	1.00e-126	446.00
IUUC-Tca-121076	Theobroma cacao	47.27	0.00e+00	906.00
IUUC-Tae-125002	Triticum aestivum	32.80	1.00e-133	470.00
IUUC-Tur-126120	Triticum urartu	40.28	7.00e-69	254.00
IUUC-Uma-129413	Ustilago maydis	30.00	1.50e-01	31.60
IUUC-Vvi-131350	Vitis vinifera	42.13	0.00e+00	696.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence