iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113957

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G303600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g033390	Sb02g033390.1	Sb02g033390.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-08	36.1	329	371
UBD/Alpha-Helix/CUE	7.80e-06	26.7	526	565

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC+ ++ +  + l+C+H+fh+ Cl  w  l +  +   +CP+Cr
   Q: 329  CAICRGPMGR-AKKLSCNHLFHLACLRSW--LDQGLMEGYSCPTCR 371
           **********.999***************..7778999*******8 PP

UBD/Alpha-Helix/CUE

   S: 2    letaleqLkeiFPnldysviqvvLeantgsleaavnnLLeg 42
           + t++++++e++P+ ++++i  +L  +t+++ a+vnnLL +
   Q: 526  VLTMVDRVREVLPHIPDELIIEDL-MRTNNINATVNNLLLM 565
           79**********************.**************87 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAAVNCLYVA AASTAASAAA LQWWASSLLD GDAGAGGDGD WLGAVLRSRV TVALLANLAA 60
HVFLVVILAL KTLFFVQLTS IETRKVLEHI INYVIYKGTF LPLVVPPTTQ QIILWSTWLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATTCTGTCC CCACTCCGCT TCGGCCCTCC CCTGTTCCTC GCGTTCCCGT CACGGCTTCG 60
CCTGCCATCG CTCGCGGCAT CGCCGCCTGC CCTCCCCTTC CCCACGCGAA TAAAGCGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003892--CUE
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51140--CUE
PS50089--ZF_RING_2

Pfam

PF02845--CUE
PF13639--zf-RING_2

SMART

SM00546--CUE
SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_02g033390

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000658	Aegilops tauschii	74.36	2.00e-65	240.00
IUUC-Atr-003008	Amborella trichopoda	50.56	1.00e-145	509.00
IUUC-Aly-006193	Arabidopsis lyrata	51.41	3.00e-139	487.00
IUUC-Ath-006950	Arabidopsis thaliana	51.78	2.00e-141	494.00
IUUC-Bdi-014169	Brachypodium distachyon	85.32	0.00e+00	766.00
IUUC-Bol-015123	Brassica oleracea	51.30	1.00e-139	489.00
IUUC-Bra-017662	Brassica rapa	51.01	1.00e-129	456.00
IUUC-Gma-043393	Glycine max	50.47	2.00e-149	521.00
IUUC-Lpe-051410	Leersia perrieri	81.88	5.00e-122	429.00
IUUC-Mtr-058643	Medicago truncatula	53.01	1.00e-153	535.00
IUUC-Mac-065495	Musa acuminata	59.79	8.00e-172	595.00
IUUC-Oba-074987	Oryza barthii	71.12	0.00e+00	625.00
IUUC-Obr-076485	Oryza brachyantha	85.66	0.00e+00	767.00
IUUC-Ogu-078481	Oryza glumaepatula	68.26	0.00e+00	647.00
IUUC-Oin-079556	Oryza indica	75.28	0.00e+00	786.00
IUUC-Olo-080588	Oryza longistaminata	91.11	1.00e-71	261.00
IUUC-Ome-081941	Oryza meridionalis	75.74	0.00e+00	714.00
IUUC-Oni-082488	Oryza nivara	62.52	8.00e-179	619.00
IUUC-Opu-083500	Oryza punctata	78.21	0.00e+00	704.00
IUUC-Oru-085082	Oryza rufipogon	71.12	0.00e+00	625.00
IUUC-Osa-085509	Oryza sativa	84.79	0.00e+00	832.00
IUUC-Ppa-095384	Physcomitrella patens	44.18	5.00e-115	407.00
IUUC-Pop-099576	Populus trichocarpa	54.03	3.00e-145	507.00
IUUC-Ppe-102033	Prunus persica	53.42	8.00e-148	516.00
IUUC-Smo-109599	Selaginella moellendorffii	43.24	3.00e-104	371.00
IUUC-Sit-110161	Setaria italica	93.82	0.00e+00	902.00
IUUC-Sly-111850	Solanum lycopersicum	53.87	5.00e-140	490.00
IUUC-Tca-121783	Theobroma cacao	54.19	2.00e-153	535.00
IUUC-Tae-125510	Triticum aestivum	79.70	0.00e+00	660.00
IUUC-Vvi-130989	Vitis vinifera	53.05	4.00e-151	527.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence