iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131680

UUCD1 version

UUC-ViV-00275

Ensembl Protein ID

VIT_02s0012g01780.t01

UniProt Accession

D7TTT7; D7TTT7_VITVI

Genbank Protein ID

CBI33852.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596247

Gene Name

VIT_02s0012g01780

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_02s0012g01780	VIT_02s0012g01780.t01	VIT_02s0012g01780.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-07	30.6	302	336

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           ++s++++a  ++ + ++s++ D  ++ WD++t ++
   Q: 302  SGSIRSIARhPElPVIASCGLDSYLRFWDIKTRKV 336
           67899999789999***************988665 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MPRTSTLECP GCPPIRALTF DVLGLVKVTE ARSKEGGIPK VVDRWGEPDS SKCILAASID 60
DRKSGPLLAI AREGGLIEIL NPLNGHPCLS ISNIIDNGPE PGDDAIVGLH LFKKQNLDLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACCCTAACG TCTCAACCTG TGTGTCTAAA GCCCTAGCCT CCCTGTTGGC TATGAATACT 60
CCGGTCTTTG TCGAGGAAGA GGAAGGAGAT ATCTAAAATT TGCATTCGAA CTGGTGTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0030687--C:preribosome, large subunit precursor
GO:0042273--P:ribosomal large subunit biogenesis

KEGG

vvi:100260812

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000787	Aegilops tauschii	58.58	1.00e-126	445.00
IUUC-Aml-001460	Ailuropoda melanoleuca	36.95	3.00e-28	118.00
IUUC-Atr-002657	Amborella trichopoda	58.70	5.00e-126	443.00
IUUC-Aly-006380	Arabidopsis lyrata	63.85	4.00e-140	490.00
IUUC-Ath-007686	Arabidopsis thaliana	61.89	2.00e-139	488.00
IUUC-Ame-011942	Astyanax mexicanus	35.82	2.00e-27	115.00
IUUC-Bta-013382	Bos taurus	37.80	2.00e-29	122.00
IUUC-Bdi-014280	Brachypodium distachyon	58.90	1.00e-131	462.00
IUUC-Bra-017855	Brassica rapa	63.20	4.00e-138	483.00
IUUC-Cja-018933	Callithrix jacchus	38.86	2.00e-26	112.00
IUUC-Cfa-020634	Canis familiaris	37.38	3.00e-29	121.00
IUUC-Cpo-022089	Cavia porcellus	38.86	1.00e-25	109.00
IUUC-Csa-023835	Chlorocebus sabaeus	36.84	3.00e-28	118.00
IUUC-Cho-024385	Choloepus hoffmanni	39.34	6.00e-06	43.10
IUUC-Cin-025691	Ciona intestinalis	32.19	1.00e-22	99.40
IUUC-Dre-028473	Danio rerio	37.89	2.00e-30	125.00
IUUC-Dno-029687	Dasypus novemcinctus	36.45	4.00e-27	114.00
IUUC-Dor-030529	Dipodomys ordii	36.78	1.00e-07	50.40
IUUC-Dme-031982	Drosophila melanogaster	27.24	3.00e-13	68.90
IUUC-Ete-032407	Echinops telfairi	42.22	3.00e-16	78.60
IUUC-Eca-033792	Equus caballus	31.67	4.00e-13	68.20
IUUC-Fca-036584	Felis catus	37.44	4.00e-29	121.00
IUUC-Gmo-039064	Gadus morhua	34.65	9.00e-30	123.00
IUUC-Gac-042170	Gasterosteus aculeatus	36.67	4.00e-29	120.00
IUUC-Gma-044150	Glycine max	66.49	2.00e-150	525.00
IUUC-Ggo-044955	Gorilla gorilla	36.84	6.00e-28	117.00
IUUC-Hsa-046615	Homo sapiens	36.84	6.00e-28	117.00
IUUC-Hvu-047119	Hordeum vulgare	60.00	9.00e-101	359.00
IUUC-Itr-048987	Ictidomys tridecemlineatus	36.36	5.00e-27	114.00
IUUC-Kpa-049188	Komagataella pastoris	27.37	8.00e-18	83.60
IUUC-Lch-050396	Latimeria chalumnae	32.84	2.00e-32	132.00
IUUC-Laf-054015	Loxodonta africana	39.43	2.00e-27	115.00
IUUC-Mcc-055589	Macaca mulatta	36.84	9.00e-28	116.00
IUUC-Meu-056160	Macropus eugenii	37.50	1.00e-13	69.30
IUUC-Mtr-057719	Medicago truncatula	64.95	4.00e-152	530.00
IUUC-Mmr-060801	Microcebus murinus	37.80	1.00e-28	120.00
IUUC-Mdo-062069	Monodelphis domestica	37.71	2.00e-26	112.00
IUUC-Mmu-063487	Mus musculus	39.08	7.00e-27	114.00
IUUC-Mpu-066542	Mustela putorius furo	38.86	2.00e-26	112.00
IUUC-Mlu-067520	Myotis lucifugus	38.86	9.00e-26	110.00
IUUC-Nle-069422	Nomascus leucogenys	36.45	6.00e-28	117.00
IUUC-Opr-070402	Ochotona princeps	28.80	4.00e-13	68.20
IUUC-Ont-072078	Oreochromis niloticus	33.88	1.00e-25	110.00
IUUC-Ocu-073886	Oryctolagus cuniculus	39.43	6.00e-27	114.00
IUUC-Obr-076206	Oryza brachyantha	56.59	4.00e-115	407.00
IUUC-Ogl-077112	Oryza glaberrima	55.86	2.00e-127	447.00
IUUC-Ogu-078172	Oryza glumaepatula	52.48	5.00e-115	406.00
IUUC-Oin-080070	Oryza indica	55.86	4.00e-127	446.00
IUUC-Olo-080534	Oryza longistaminata	52.54	1.00e-97	350.00
IUUC-Ome-081869	Oryza meridionalis	54.01	6.00e-123	433.00
IUUC-Opu-083828	Oryza punctata	56.84	4.00e-123	433.00
IUUC-Oru-084690	Oryza rufipogon	52.96	1.00e-119	422.00
IUUC-Ola-087342	Oryzias latipes	32.46	4.00e-24	104.00
IUUC-Oga-088865	Otolemur garnettii	34.98	4.00e-26	111.00
IUUC-Oar-090030	Ovis aries	37.32	6.00e-29	120.00
IUUC-Pan-092461	Papio anubis	36.84	9.00e-28	116.00
IUUC-Psi-093061	Pelodiscus sinensis	36.93	3.00e-27	115.00
IUUC-Pma-094281	Petromyzon marinus	34.58	9.00e-26	110.00
IUUC-Ppa-095623	Physcomitrella patens	45.75	1.00e-95	342.00
IUUC-Pfo-097074	Poecilia formosa	36.46	1.00e-22	99.40
IUUC-Pab-098290	Pongo abelii	36.84	6.00e-28	117.00
IUUC-Pop-099602	Populus trichocarpa	75.14	2.00e-163	567.00
IUUC-Pca-100383	Procavia capensis	39.43	4.00e-26	111.00
IUUC-Ppe-101867	Prunus persica	72.70	1.00e-162	565.00
IUUC-Pva-103218	Pteropus vampyrus	26.57	1.00e-08	53.10
IUUC-Rno-105494	Rattus norvegicus	37.02	9.00e-28	116.00
IUUC-Sha-107127	Sarcophilus harrisii	36.45	3.00e-27	115.00
IUUC-Sit-110466	Setaria italica	59.73	2.00e-122	431.00
IUUC-Sbi-113854	Sorghum bicolor	60.00	1.00e-127	449.00
IUUC-Ssc-116144	Sus scrofa	39.43	2.00e-27	115.00
IUUC-Tru-118516	Takifugu rubripes	33.85	3.00e-26	111.00
IUUC-Tni-120527	Tetraodon nigroviridis	35.16	1.00e-26	112.00
IUUC-Tae-123088	Triticum aestivum	59.56	9.00e-129	452.00
IUUC-Tur-126054	Triticum urartu	59.46	9.00e-100	356.00
IUUC-Tbe-127232	Tupaia belangeri	29.71	1.00e-10	60.10
IUUC-Ttr-128529	Tursiops truncatus	36.84	2.00e-27	115.00
IUUC-Vpa-130703	Vicugna pacos	37.32	4.00e-20	91.30
IUUC-Xtr-132802	Xenopus tropicalis	31.39	1.00e-10	59.70
IUUC-Xma-133396	Xiphophorus maculatus	29.83	9.00e-12	63.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence