iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095806

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545055

Gene Name

PHYPADRAFT_140362

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S166_91V6	PP1S166_91V6.1	PP1S166_91V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.50e-08	34.3	101	143

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  +d +++lp C+H+fh +C+  w         + +CPlCr
   Q: 101  CAVCLNEFanEDKLRLLPkCKHAFHMECIDTW------LLSNSTCPLCR 143
           ********88555*******************......888889****8 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MRQLQQLSPS KPHINPSVLV IVIILSVVFF CSGVLHILAR CLGRRRTRAP AGELHSPGNS 60
IRGQLQHLFS MHDSGVEQVF IDTLPVFLYG SIRGLKDSAD CAVCLNEFAN EDKLRLLPKC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGACAAT TGCAACAACT AAGCCCTAGC AAACCCCACA TCAACCCTAG TGTCCTAGTG 60
ATAGTCATTA TCTTAAGTGT TGTATTCTTT TGCTCCGGTG TACTCCATAT TCTCGCTCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ppp:PHYPADRAFT_140362

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002500	Amborella trichopoda	75.32	3.00e-32	132.00
IUUC-Apl-003834	Anas platyrhynchos	41.30	3.00e-16	79.70
IUUC-Aly-006179	Arabidopsis lyrata	79.17	1.00e-29	123.00
IUUC-Ath-007441	Arabidopsis thaliana	74.12	1.00e-33	136.00
IUUC-Ame-011730	Astyanax mexicanus	43.01	7.00e-17	81.60
IUUC-Bdi-014934	Brachypodium distachyon	60.27	1.00e-37	150.00
IUUC-Bra-017741	Brassica rapa	59.62	7.00e-35	140.00
IUUC-Dre-028428	Danio rerio	41.94	5.00e-16	79.00
IUUC-Fal-036981	Ficedula albicollis	41.30	1.00e-16	80.90
IUUC-Gmo-039344	Gadus morhua	43.01	9.00e-17	81.30
IUUC-Gga-041114	Gallus gallus	41.30	3.00e-16	79.70
IUUC-Gma-043592	Glycine max	39.41	8.00e-39	154.00
IUUC-Lch-050541	Latimeria chalumnae	40.66	1.00e-15	77.80
IUUC-Lpe-051680	Leersia perrieri	41.32	1.00e-36	146.00
IUUC-Mtr-058782	Medicago truncatula	65.55	5.00e-33	134.00
IUUC-Mac-065396	Musa acuminata	48.00	2.00e-34	139.00
IUUC-Oba-075403	Oryza barthii	56.25	9.00e-37	147.00
IUUC-Obr-076503	Oryza brachyantha	60.31	3.00e-36	145.00
IUUC-Ogl-077574	Oryza glaberrima	56.25	9.00e-37	147.00
IUUC-Ogu-077986	Oryza glumaepatula	56.25	9.00e-37	147.00
IUUC-Oin-079091	Oryza indica	56.25	8.00e-37	147.00
IUUC-Olo-080854	Oryza longistaminata	61.74	5.00e-37	147.00
IUUC-Ome-081627	Oryza meridionalis	56.25	8.00e-37	147.00
IUUC-Oni-082260	Oryza nivara	56.25	8.00e-37	147.00
IUUC-Opu-083578	Oryza punctata	56.25	8.00e-37	147.00
IUUC-Oru-084794	Oryza rufipogon	56.25	9.00e-37	147.00
IUUC-Osa-085348	Oryza sativa	56.25	9.00e-37	147.00
IUUC-Pop-099449	Populus trichocarpa	41.51	5.00e-39	154.00
IUUC-Ppe-101557	Prunus persica	40.54	8.00e-36	144.00
IUUC-Smo-109112	Selaginella moellendorffii	77.61	3.00e-31	125.00
IUUC-Sit-110646	Setaria italica	54.39	1.00e-35	143.00
IUUC-Sly-111133	Solanum lycopersicum	39.81	2.00e-42	166.00
IUUC-Stu-112868	Solanum tuberosum	61.07	6.00e-41	160.00
IUUC-Sbi-114435	Sorghum bicolor	70.73	3.00e-32	132.00
IUUC-Tgu-117477	Taeniopygia guttata	41.30	1.00e-16	80.90
IUUC-Tni-119675	Tetraodon nigroviridis	43.01	1.00e-16	80.50
IUUC-Tca-121367	Theobroma cacao	54.62	3.00e-33	135.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence