iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099448

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

EF145875

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s16830	POPTR_0014s16830.3	POPTR_0014s16830.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.00e-08	35.7	98	140

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+ f  + +  +l+CgH+fh+ Cl+kw     + + +++CPlCr
   Q: 98   CSVCLTQFepESEINSLSCGHIFHKMCLEKW-----LDYWNITCPLCR 140
           ********5533377799*************.....89*********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGLSSLPAPS EGVLCVLLVN TALSISIVKG IVRSILHIVG IRLSPSASLP SSDNAEDTRE 60
SLEFRLSPPE NYIEEFRSRM PSIRFNTVCS CEQPEHDCSV CLTQFEPESE INSLSCGHIF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGAAAGAGGG ATGAAGATAT AAAGTAACCA TGGTAAGAAG GTGATCAGCT TCCGGAAAAC 60
ACGGAAGACT AACCATGGTT CAGGAAAATG AGTTTAGTTT GCTGATGATC GGTAAAGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002705	Amborella trichopoda	49.29	4.00e-34	136.00
IUUC-Aly-005890	Arabidopsis lyrata	66.89	1.00e-45	174.00
IUUC-Ath-006955	Arabidopsis thaliana	64.29	9.00e-47	178.00
IUUC-Ani-009448	Aspergillus nidulans	33.70	2.00e-10	56.60
IUUC-Bdi-014109	Brachypodium distachyon	34.75	8.00e-18	82.40
IUUC-Bol-015727	Brassica oleracea	62.33	1.00e-49	187.00
IUUC-Bra-017460	Brassica rapa	60.14	2.00e-48	184.00
IUUC-Gma-043655	Glycine max	76.62	1.00e-61	227.00
IUUC-Hvu-047116	Hordeum vulgare	34.75	3.00e-15	73.60
IUUC-Lpe-051313	Leersia perrieri	40.00	8.00e-24	102.00
IUUC-Mtr-058124	Medicago truncatula	70.32	1.00e-58	218.00
IUUC-Mac-064673	Musa acuminata	47.65	1.00e-26	111.00
IUUC-Oba-075151	Oryza barthii	66.67	1.00e-13	68.90
IUUC-Ogl-077775	Oryza glaberrima	43.84	5.00e-21	93.20
IUUC-Ogu-078543	Oryza glumaepatula	65.00	6.00e-12	62.80
IUUC-Oin-079546	Oryza indica	43.84	5.00e-21	93.20
IUUC-Ome-081545	Oryza meridionalis	40.54	1.00e-22	98.60
IUUC-Oni-082196	Oryza nivara	43.84	5.00e-21	93.20
IUUC-Opu-083519	Oryza punctata	42.76	5.00e-22	96.70
IUUC-Oru-084312	Oryza rufipogon	44.52	1.00e-21	95.10
IUUC-Osa-086234	Oryza sativa	43.84	5.00e-21	93.20
IUUC-Ppe-101936	Prunus persica	71.43	3.00e-58	216.00
IUUC-Sit-110820	Setaria italica	36.62	8.00e-15	72.40
IUUC-Sly-111064	Solanum lycopersicum	52.99	6.00e-34	135.00
IUUC-Stu-112754	Solanum tuberosum	55.84	2.00e-45	173.00
IUUC-Sbi-114815	Sorghum bicolor	39.04	1.00e-20	92.00
IUUC-Tca-121106	Theobroma cacao	77.12	1.00e-61	227.00
IUUC-Tae-123732	Triticum aestivum	61.22	9.00e-15	73.60
IUUC-Vvi-131394	Vitis vinifera	74.51	8.00e-59	219.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence