iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Laf-054589

Ensembl Protein ID

ENSLAFP00000021367.1

UniProt Accession

G3U0K9; G3U0K9_LOXAF

Protein Name

Uncharacterized protein

Gene Name

RAD23A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLAFG00000029782.1	ENSLAFT00000031575.1	ENSLAFP00000021367.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	8.30e-21	73.8	162	201
ULD/UDP/UBQ/UBQ_PIM	3.10e-26	91.5	3	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 2    ededkleqlveMGFdreealqaLraannnleaAveyLldg 41
           e+e +l ++++MG++re+++ aLra++nn+ +AveyLl+g
   Q: 162  EYETMLTEIMSMGYERERVVAALRASYNNPHRAVEYLLTG 201
           7899**********************************97 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           +++t+ktl++++f++++++d+tv+ lKeki++e+g   +p++ qkLIyaGkiL+Dd +++++ i+++++v+++v+k+k
   Q: 3    VTITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGrdaFPVAGQKLIYAGKILSDDVPIRDYRIDEKNFVVVMVTKAK 80
           68*************************************************************************987 PP

Organism

Loxodonta africana

Protein Sequence
(Fasta)

MAVTITLKTL QQQTFKIRME PDETVKVLKE KIEAEKGRDA FPVAGQKLIY AGKILSDDVP 60
IRDYRIDEKN FVVVMVTKAK AGPGTSAPPE TSPTAAPESS TSFPPAPASG MSHPPPTAKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGTCA CCATCACGCT CAAAACGCTG CAGCAGCAGA CCTTCAAGAT CCGCATGGAA 60
CCTGATGAGA CGGTGCGGGC CGGGCTGAGC CCCGCGGGCA GGAGCTACGA CGGGTGCCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005815--C:microtubule organizing center
GO:0005654--C:nucleoplasm
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0045070--P:positive regulation of viral genome replication
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process

KEGG

lav:100653568

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001515	Ailuropoda melanoleuca	92.76	1.00e-144	505.00
IUUC-Atr-002756	Amborella trichopoda	34.79	2.00e-49	189.00
IUUC-Aca-004704	Anolis carolinensis	78.49	1.00e-111	395.00
IUUC-Aly-005694	Arabidopsis lyrata	36.50	2.00e-51	196.00
IUUC-Ath-007157	Arabidopsis thaliana	33.08	1.00e-48	186.00
IUUC-Ani-009460	Aspergillus nidulans	38.40	3.00e-29	122.00
IUUC-Bgr-012056	Blumeria graminis	35.55	6.00e-22	98.20
IUUC-Bta-012377	Bos taurus	95.59	8.00e-149	519.00
IUUC-Bci-013933	Botrytis cinerea	35.16	2.00e-20	93.60
IUUC-Bdi-014355	Brachypodium distachyon	32.67	7.00e-42	164.00
IUUC-Bol-015272	Brassica oleracea	33.67	4.00e-50	191.00
IUUC-Bra-016970	Brassica rapa	32.40	3.00e-49	189.00
IUUC-Cel-018364	Caenorhabditis elegans	30.16	1.00e-25	110.00
IUUC-Cja-018946	Callithrix jacchus	95.59	9.00e-145	506.00
IUUC-Cfa-020577	Canis familiaris	97.25	1.00e-155	541.00
IUUC-Cpo-021850	Cavia porcellus	91.74	2.00e-164	571.00
IUUC-Csa-023183	Chlorocebus sabaeus	96.69	9.00e-153	532.00
IUUC-Csv-025823	Ciona savignyi	41.33	5.00e-38	150.00
IUUC-Cgl-026495	Colletotrichum gloeosporioides	43.14	2.00e-14	73.60
IUUC-Cne-027056	Cryptococcus neoformans	44.87	1.00e-12	67.40
IUUC-Cme-027260	Cyanidioschyzon merolae	26.59	2.00e-23	103.00
IUUC-Dno-030017	Dasypus novemcinctus	93.22	9.00e-130	456.00
IUUC-Dor-030358	Dipodomys ordii	84.07	3.00e-126	444.00
IUUC-Dme-032027	Drosophila melanogaster	39.38	4.00e-63	235.00
IUUC-Eca-033599	Equus caballus	92.92	9.00e-136	476.00
IUUC-Fca-036051	Felis catus	96.42	2.00e-153	534.00
IUUC-Fso-038107	Fusarium solani	49.50	1.00e-15	77.40
IUUC-Gmo-038528	Gadus morhua	57.18	2.00e-88	319.00
IUUC-Gac-042239	Gasterosteus aculeatus	54.66	7.00e-89	320.00
IUUC-Gma-044245	Glycine max	36.18	4.00e-53	201.00
IUUC-Ggo-045084	Gorilla gorilla	96.97	8.00e-153	533.00
IUUC-Hsa-046614	Homo sapiens	96.97	2.00e-153	535.00
IUUC-Itr-047875	Ictidomys tridecemlineatus	96.42	2.00e-172	598.00
IUUC-Loc-051758	Lepisosteus oculatus	62.85	5.00e-86	310.00
IUUC-Lma-053328	Leptosphaeria maculans	50.00	3.00e-12	62.80
IUUC-Mcc-055860	Macaca mulatta	96.69	9.00e-153	532.00
IUUC-Meu-056459	Macropus eugenii	92.56	1.00e-103	369.00
IUUC-Mtr-058239	Medicago truncatula	33.17	2.00e-47	182.00
IUUC-Mmr-060819	Microcebus murinus	96.42	8.00e-167	579.00
IUUC-Mdo-062742	Monodelphis domestica	84.42	1.00e-142	498.00
IUUC-Mmu-063929	Mus musculus	93.66	7.00e-162	563.00
IUUC-Mac-065180	Musa acuminata	33.59	1.00e-43	170.00
IUUC-Mpu-066684	Mustela putorius furo	96.97	1.00e-157	548.00
IUUC-Mlu-067787	Myotis lucifugus	94.77	9.00e-152	529.00
IUUC-Nle-069846	Nomascus leucogenys	85.83	1.00e-132	465.00
IUUC-Oan-073572	Ornithorhynchus anatinus	79.89	8.00e-131	459.00
IUUC-Ocu-074968	Oryctolagus cuniculus	93.63	2.00e-103	369.00
IUUC-Oba-074972	Oryza barthii	34.13	3.00e-46	178.00
IUUC-Ogl-077067	Oryza glaberrima	35.19	2.00e-49	189.00
IUUC-Ogu-078883	Oryza glumaepatula	37.90	7.00e-32	131.00
IUUC-Oin-079203	Oryza indica	35.28	2.00e-49	189.00
IUUC-Olo-080559	Oryza longistaminata	33.59	1.00e-46	180.00
IUUC-Ome-081866	Oryza meridionalis	37.90	7.00e-32	131.00
IUUC-Oni-082812	Oryza nivara	34.13	5.00e-46	177.00
IUUC-Oru-084816	Oryza rufipogon	37.90	1.00e-31	130.00
IUUC-Osa-085951	Oryza sativa	35.28	2.00e-49	189.00
IUUC-Oga-089075	Otolemur garnettii	96.42	1.00e-148	518.00
IUUC-Oar-090387	Ovis aries	95.04	1.00e-145	509.00
IUUC-Ptr-090912	Pan troglodytes	93.39	2.00e-142	498.00
IUUC-Pan-092140	Papio anubis	96.69	3.00e-152	530.00
IUUC-Psi-093347	Pelodiscus sinensis	85.94	1.00e-60	226.00
IUUC-Pno-095064	Phaeosphaeria nodorum	37.19	7.00e-17	81.30
IUUC-Pfo-096607	Poecilia formosa	62.46	5.00e-95	341.00
IUUC-Pab-097738	Pongo abelii	93.11	3.00e-146	510.00
IUUC-Pca-100348	Procavia capensis	95.60	8.00e-147	513.00
IUUC-Ppe-101522	Prunus persica	34.16	6.00e-51	194.00
IUUC-Pva-102412	Pteropus vampyrus	96.69	5.00e-156	543.00
IUUC-Pgr-103618	Puccinia graminis	36.92	1.00e-24	107.00
IUUC-Rno-105569	Rattus norvegicus	93.66	1.00e-148	518.00
IUUC-Sha-106918	Sarcophilus harrisii	85.42	8.00e-131	459.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	40.00	2.00e-33	136.00
IUUC-Smo-109129	Selaginella moellendorffii	38.65	2.00e-32	133.00
IUUC-Sit-109813	Setaria italica	34.90	6.00e-47	181.00
IUUC-Sbi-114459	Sorghum bicolor	31.51	2.00e-45	176.00
IUUC-Ssc-115460	Sus scrofa	96.14	2.00e-154	538.00
IUUC-Tsy-119385	Tarsius syrichta	80.15	1.00e-70	258.00
IUUC-Tni-120493	Tetraodon nigroviridis	69.77	3.00e-72	265.00
IUUC-Tca-121594	Theobroma cacao	35.53	9.00e-51	193.00
IUUC-Tme-127092	Tuber melanosporum	36.54	6.00e-26	111.00
IUUC-Tbe-127603	Tupaia belangeri	85.40	1.00e-55	210.00
IUUC-Ttr-129232	Tursiops truncatus	86.23	1.00e-144	505.00
IUUC-Xma-133503	Xiphophorus maculatus	54.20	1.00e-87	316.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence