iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017119

Ensembl Protein ID

Bra024386.1-P

UniProt Accession

M4E6I2; M4E6I2_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra024386	Bra024386.1	Bra024386.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.60e-72	244.9	365	667

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEf 95
           +Gl NlgN+CY N vLQcL+++++l ++l +  ++++++     +++ +++++++ l+ +   + ++  sp ++l+ l+k+ +++   +q+Da+Ef
   Q: 365  FGLVNLGNSCYANVVLQCLAFTRPLISYLIRgIHSKACR-----KKSWCFVCEFEFLILKS-RGGESPLSPIKILSRLQKIGKHLGPGKQEDAHEF 454
           6******************************55555555.....5678**********888.99999***************************** PP
   S: 96   laflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcL 191
           l++ +d++++ +                  l++     +  ++++l+  +F+g l+s+ikc +c ++s+r+e ++dl++++ g+      sl+++L
   Q: 455  LRCAVDTMQSVF------------------LKEADAAGPLAEETTLVGLTFGGYLHSKIKCMKCLHKSERTELMMDLTVEIGGDIG----SLEEAL 528
           ************..................22334567899999****************************************95....8***** PP
   S: 192  esftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHs 287
           ++ft+ e l+gen+y c++ck++q+a+kkl++ + P++L++ LkRf+ ++      k++k ++fp+ Ld+sp++++p+ +++ +  Y+L+avvvH 
   Q: 529  AQFTAYEVLDGENRYLCDRCKSYQKAKKKLMILEGPNILTVVLKRFESDN----FGKLSKPIHFPELLDISPYMSNPNHGDH-HPMYSLYAVVVHL 619
           **********************************************5544....479*********************9996.9************ PP
   S: 288  G.slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
             ++ sGHYv+y+kn +g+W+++dDs+V +v+ ++vl    + aY+l+Y r
   Q: 620  DaTSYSGHYVCYIKNLHGDWFKIDDSNVFPVPLQTVLL---EGAYMLLYAR 667
           **************************************...********87 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSPFLLIGCL MLAFLLIRRQ WRSAAVKREE VLRLISLATE ESYLAAEKKE EEARATVDYY 60
GSSSVPPDVY SCAVCHYPTT TRCAQCKSVR YCSSKCQILH WRRGHKEECR PPPLHDFDRE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTCCTT TTCTCCTAAT TGGATGCCTG ATGCTGGCTT TTCTCCTAAT CCGCCGCCAA 60
TGGAGATCCG CCGCCGTGAA GCGGGAGGAG GTTCTTCGGC TTATCTCTTT AGCCACCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0732--Signal

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006266	Arabidopsis lyrata	74.77	0.00e+00	1018.00
IUUC-Ath-007508	Arabidopsis thaliana	76.34	0.00e+00	1036.00
IUUC-Bol-015937	Brassica oleracea	94.19	0.00e+00	1273.00
IUUC-Gma-043931	Glycine max	61.94	5.00e-145	508.00
IUUC-Lpe-051561	Leersia perrieri	44.74	2.00e-133	469.00
IUUC-Mtr-058108	Medicago truncatula	62.47	2.00e-144	506.00
IUUC-Oba-075163	Oryza barthii	44.53	2.00e-137	483.00
IUUC-Ogl-077565	Oryza glaberrima	44.46	1.00e-137	483.00
IUUC-Ogu-078675	Oryza glumaepatula	44.50	8.00e-121	427.00
IUUC-Oin-079111	Oryza indica	45.38	3.00e-133	469.00
IUUC-Ome-081510	Oryza meridionalis	44.04	1.00e-123	437.00
IUUC-Oni-082570	Oryza nivara	44.33	3.00e-137	482.00
IUUC-Opu-083249	Oryza punctata	44.70	1.00e-130	460.00
IUUC-Oru-084237	Oryza rufipogon	44.33	3.00e-137	483.00
IUUC-Osa-085297	Oryza sativa	44.33	3.00e-137	483.00
IUUC-Ppe-101893	Prunus persica	66.76	7.00e-139	487.00
IUUC-Sit-110237	Setaria italica	44.87	5.00e-140	491.00
IUUC-Tca-121704	Theobroma cacao	63.22	2.00e-152	533.00
IUUC-Tae-125414	Triticum aestivum	54.74	1.00e-124	441.00
IUUC-Tur-126736	Triticum urartu	54.74	1.00e-124	440.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence