iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014597

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000883

Gene Name

LOC100840263; BRADI_4g33130

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI4G33130	BRADI4G33130.1	BRADI4G33130.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.20e-09	38.3	96	138

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplv..lpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cl +f+ + +v  lpCgH+fh+ Cl+ w     + + +++CPlCr
   Q: 96   CRVCLVRFEAEAVVnrLPCGHLFHRACLETW-----LDYDHATCPLCR 138
           9*******8887763377*************.....89*********8 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MGISSMPAPK ESLLIYLLFN AVVSIAALAG LLRSVLVFLG LPAPPPLLSG EDGESDHHHQ 60
QQLAAGPSLA ERFRSRFRPA RFGRRRGGAA AAAPDCRVCL VRFEAEAVVN RLPCGHLFHR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCATCT CCAGCATGCC GGCGCCCAAG GAGAGCCTCC TGATCTACCT GCTCTTCAAC 60
GCGGTGGTCT CGATCGCCGC CCTGGCAGGC CTGCTTAGAT CGGTGCTCGT GTTCCTCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

bdi:100840263

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002705	Amborella trichopoda	41.84	6.00e-20	89.00
IUUC-Aly-005890	Arabidopsis lyrata	35.81	3.00e-21	93.20
IUUC-Bol-015727	Brassica oleracea	36.84	6.00e-24	102.00
IUUC-Bra-017460	Brassica rapa	36.42	1.00e-22	97.80
IUUC-Gma-043724	Glycine max	41.50	1.00e-23	101.00
IUUC-Hvu-047116	Hordeum vulgare	81.43	1.00e-35	140.00
IUUC-Mtr-058124	Medicago truncatula	38.78	4.00e-22	96.30
IUUC-Oba-075151	Oryza barthii	60.96	6.00e-26	108.00
IUUC-Ogu-078543	Oryza glumaepatula	97.50	4.00e-20	89.70
IUUC-Ome-081882	Oryza meridionalis	97.78	1.00e-22	98.60
IUUC-Oni-082979	Oryza nivara	97.78	1.00e-22	98.60
IUUC-Opu-083229	Oryza punctata	97.50	5.00e-20	89.70
IUUC-Oru-084186	Oryza rufipogon	97.50	5.00e-20	89.70
IUUC-Sit-110820	Setaria italica	63.38	1.00e-26	111.00
IUUC-Sly-111828	Solanum lycopersicum	57.14	1.00e-16	76.30
IUUC-Sbi-114815	Sorghum bicolor	65.58	7.00e-33	132.00
IUUC-Tae-123732	Triticum aestivum	81.71	1.00e-41	162.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence