iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131024

Ensembl Protein ID

VIT_01s0011g04970.t01

UniProt Accession

F6HFH8; F6HFH8_VITVI

Genbank Protein ID

CCB50827.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595752

Gene Name

VIT_01s0011g04970

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_01s0011g04970	VIT_01s0011g04970.t01	VIT_01s0011g04970.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.30e-07	30.3	162	185

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf.sd.tllvsGsdDgtikvWDl 30
           l f +d  +l++G+ Dg+++v+ +
   Q: 162  LTFnNDgSMLAVGGEDGNLRVFKW 185
           56788899*************986 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MGKAKNPDPP NYKKYGVPLY GAAWAPSTII NDAPQPLDQK QEADEVSGEG STPSPAAPTY 60
LVFCGGGGEG RSGIPNALLL AEFDFASNSL SDMPVFKLGI GADLPYRMAV HPGGEGLICS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACAGAAGGG TAAGCGAAAG CGAAGGTGGC TAGGGACTAT GGGGAAGGCC AAGAATCCAG 60
ATCCTCCGAA CTACAAGAAG TACGGTGTCC CTTTGTATGG AGCTGCGTGG GCGCCGTCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0677--Repeat
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030176--C:integral component of endoplasmic reticulum membrane
GO:0005096--F:GTPase activator activity
GO:0051020--F:GTPase binding
GO:0005090--F:Sar guanyl-nucleotide exchange factor activity
GO:0009306--P:protein secretion
GO:0003400--P:regulation of COPII vesicle coating

KEGG

vvi:100242169

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001671	Ailuropoda melanoleuca	28.52	1.00e-19	89.70
IUUC-Aly-005479	Arabidopsis lyrata	50.13	2.00e-94	338.00
IUUC-Ath-007466	Arabidopsis thaliana	51.67	4.00e-96	343.00
IUUC-Bta-012386	Bos taurus	28.35	2.00e-19	89.00
IUUC-Bdi-014110	Brachypodium distachyon	51.43	1.00e-84	305.00
IUUC-Bra-016660	Brassica rapa	51.41	6.00e-93	333.00
IUUC-Cja-018998	Callithrix jacchus	27.97	4.00e-18	85.10
IUUC-Cfa-020666	Canis familiaris	29.12	2.00e-20	92.40
IUUC-Cpo-022030	Cavia porcellus	30.17	8.00e-19	87.00
IUUC-Csa-023521	Chlorocebus sabaeus	28.40	9.00e-18	83.60
IUUC-Cin-025431	Ciona intestinalis	26.89	6.00e-13	67.80
IUUC-Dre-027832	Danio rerio	25.00	5.00e-16	78.20
IUUC-Dno-028989	Dasypus novemcinctus	28.91	1.00e-19	90.10
IUUC-Dme-031901	Drosophila melanogaster	28.21	2.00e-15	76.30
IUUC-Ete-032290	Echinops telfairi	28.35	1.00e-14	73.60
IUUC-Eca-033917	Equus caballus	28.74	1.00e-19	89.70
IUUC-Fca-036323	Felis catus	29.50	1.00e-20	93.60
IUUC-Gmo-038693	Gadus morhua	24.56	8.00e-16	77.40
IUUC-Gga-040702	Gallus gallus	28.52	8.00e-17	80.90
IUUC-Gac-042635	Gasterosteus aculeatus	25.11	7.00e-13	67.80
IUUC-Gma-043946	Glycine max	59.47	2.00e-118	418.00
IUUC-Ggo-044648	Gorilla gorilla	28.21	3.00e-18	85.50
IUUC-Hsa-046003	Homo sapiens	28.12	9.00e-19	87.00
IUUC-Itr-048613	Ictidomys tridecemlineatus	28.74	3.00e-18	85.50
IUUC-Lch-049473	Latimeria chalumnae	26.67	1.00e-17	83.20
IUUC-Lpe-051586	Leersia perrieri	48.33	1.00e-87	316.00
IUUC-Loc-052177	Lepisosteus oculatus	26.00	2.00e-16	79.30
IUUC-Laf-054366	Loxodonta africana	28.52	7.00e-19	87.40
IUUC-Mcc-055775	Macaca mulatta	28.52	4.00e-19	88.20
IUUC-Meu-056562	Macropus eugenii	27.51	5.00e-10	57.80
IUUC-Mtr-058661	Medicago truncatula	60.64	5.00e-126	443.00
IUUC-Mla-058865	Melampsora laricipopulina	24.92	1.00e-11	63.50
IUUC-Mvi-060443	Microbotryum violaceum	21.17	1.00e-10	60.50
IUUC-Mmr-061126	Microcebus murinus	28.17	7.00e-19	87.40
IUUC-Mdo-062928	Monodelphis domestica	27.19	1.00e-14	73.20
IUUC-Mmu-064083	Mus musculus	27.91	3.00e-20	91.70
IUUC-Mac-064955	Musa acuminata	55.56	6.00e-116	409.00
IUUC-Mpu-066857	Mustela putorius furo	29.12	2.00e-20	92.40
IUUC-Mlu-067891	Myotis lucifugus	28.08	1.00e-18	87.00
IUUC-Nle-070030	Nomascus leucogenys	28.63	3.00e-18	85.50
IUUC-Opr-070864	Ochotona princeps	29.36	2.00e-18	85.90
IUUC-Ont-072204	Oreochromis niloticus	26.36	8.00e-16	77.40
IUUC-Oan-073643	Ornithorhynchus anatinus	31.38	8.00e-17	79.70
IUUC-Ocu-074217	Oryctolagus cuniculus	27.41	4.00e-17	81.30
IUUC-Oba-075587	Oryza barthii	48.12	1.00e-83	302.00
IUUC-Obr-076826	Oryza brachyantha	50.17	2.00e-91	328.00
IUUC-Ogl-077927	Oryza glaberrima	47.84	3.00e-81	294.00
IUUC-Ogu-078241	Oryza glumaepatula	47.48	6.00e-81	293.00
IUUC-Oin-080217	Oryza indica	47.84	5.00e-81	293.00
IUUC-Olo-081060	Oryza longistaminata	48.57	7.00e-69	253.00
IUUC-Ome-082007	Oryza meridionalis	47.67	2.00e-85	308.00
IUUC-Oni-082827	Oryza nivara	47.84	5.00e-81	293.00
IUUC-Opu-083159	Oryza punctata	48.51	5.00e-87	313.00
IUUC-Oru-085039	Oryza rufipogon	47.84	5.00e-81	293.00
IUUC-Osa-086258	Oryza sativa	47.84	5.00e-81	293.00
IUUC-Ola-087223	Oryzias latipes	24.80	7.00e-17	80.90
IUUC-Oga-088417	Otolemur garnettii	27.86	1.00e-17	83.60
IUUC-Oar-090435	Ovis aries	28.35	2.00e-19	89.40
IUUC-Ptr-090869	Pan troglodytes	28.12	2.00e-12	66.20
IUUC-Pan-092527	Papio anubis	28.40	9.00e-18	83.60
IUUC-Pma-094156	Petromyzon marinus	31.34	1.00e-17	83.20
IUUC-Ppa-095614	Physcomitrella patens	39.66	2.00e-63	235.00
IUUC-Pfo-097488	Poecilia formosa	25.97	3.00e-14	72.00
IUUC-Pab-097720	Pongo abelii	28.12	8.00e-19	87.40
IUUC-Pop-099618	Populus trichocarpa	61.11	2.00e-134	471.00
IUUC-Pca-100288	Procavia capensis	28.78	9.00e-16	77.00
IUUC-Ppe-101864	Prunus persica	62.71	7.00e-110	389.00
IUUC-Pva-103192	Pteropus vampyrus	29.89	1.00e-20	93.60
IUUC-Pgr-103489	Puccinia graminis	22.75	2.00e-09	56.20
IUUC-Ptt-103883	Puccinia triticina	32.61	2.00e-09	55.80
IUUC-Rno-106123	Rattus norvegicus	27.91	3.00e-20	92.00
IUUC-Sha-107169	Sarcophilus harrisii	26.29	1.00e-14	73.60
IUUC-Smo-109265	Selaginella moellendorffii	39.72	2.00e-55	208.00
IUUC-Sly-111551	Solanum lycopersicum	61.20	1.00e-116	412.00
IUUC-Stu-112264	Solanum tuberosum	61.08	3.00e-117	414.00
IUUC-Sar-113218	Sorex araneus	29.13	7.00e-16	76.30
IUUC-Sre-115183	Sporisorium reilianum	26.32	2.00e-07	49.30
IUUC-Ssc-115282	Sus scrofa	28.12	8.00e-19	87.00
IUUC-Tru-117866	Takifugu rubripes	27.20	2.00e-16	79.30
IUUC-Tca-121083	Theobroma cacao	60.78	7.00e-127	446.00
IUUC-Tae-124218	Triticum aestivum	52.16	2.00e-86	311.00
IUUC-Ttr-128585	Tursiops truncatus	28.63	8.00e-19	87.00
IUUC-Uma-129598	Ustilago maydis	19.38	4.00e-11	61.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence