iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080395

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN540836.1_FG005	KN540836.1_FGT005	KN540836.1_FGP005

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.50e-08	34.4	162	203

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl df  +d ++++pC H fh++Cl +w       + + +CPlCr
   Q: 162  CAVCLRDFeeEDTLRTMPCSHSFHENCLFRW------LRDSCLCPLCR 203
           ********66444******************......**********8 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MDPPARRLMD SRAAAQLEAP LSDPYAAETF EDLLRELGVD PSIHTIVRSA GRWMDPAAAA 60
ARVPVRFHRT LQRLGIDPNS DARSIRDMLQ EFYRVVYQGK VYWAGRVIRP RPSPMLGRRR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCCGC CGGCTCGCAG ATTGATGGAT TCTCGGGCGG CGGCGCAGTT GGAGGCGCCA 60
CTTTCTGATC CATACGCGGC AGAAACATTC GAAGACCTAC TCCGAGAATT GGGAGTCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011731	Astyanax mexicanus	45.45	6.00e-12	62.40
IUUC-Opr-070664	Ochotona princeps	47.17	6.00e-10	58.50
IUUC-Oba-075281	Oryza barthii	94.42	3.00e-103	366.00
IUUC-Ogl-077802	Oryza glaberrima	94.42	3.00e-103	366.00
IUUC-Ogu-078269	Oryza glumaepatula	94.31	2.00e-101	362.00
IUUC-Oin-079615	Oryza indica	91.32	1.00e-98	350.00
IUUC-Ome-081724	Oryza meridionalis	93.95	5.00e-101	361.00
IUUC-Oni-083042	Oryza nivara	91.32	1.00e-98	350.00
IUUC-Opu-083520	Oryza punctata	78.51	3.00e-86	310.00
IUUC-Oru-084685	Oryza rufipogon	91.47	3.00e-95	340.00
IUUC-Osa-086223	Oryza sativa	51.90	3.00e-20	89.40
IUUC-Sit-109933	Setaria italica	56.52	8.00e-19	85.10
IUUC-Tca-121207	Theobroma cacao	50.00	8.00e-14	70.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence