iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-096021

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544892

Gene Name

PHYPADRAFT_111967

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S124_87V6	PP1S124_87V6.1	PP1S124_87V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.70e-23	82.6	257	332

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceens 73
           ++e+f+Cp+++++M+dP +l++G+ty+r +Ie+w++++++      cP+t+q++ ++ ++P+l+lr++i++w ++n+
   Q: 257  LYEAFVCPLTKQVMQDPATLENGQTYERVAIERWIQKCKEdgrrlLCPMTGQEV-STAVKPSLALRNTIEEWTQRNE 332
           689********************************998888889**********.99*****************997 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MDDGLDLLQL PMAEAATQFL VDKLVEAVSA SAKVVVEHEN FQVLVDILDS IKQVLLDLEE 60
GGDIFQLEAL MRELEQDIDE ALELIAFCTI KCRIYLLLHC RAISKQLEDV TRRMGRRLAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGATG GGTTGGACTT GTATGTTGTT CTAAACCGAG CTTTTGGTTG TTGTTCGTGG 60
GTTTGTTGTT GGTGGGGTGA TCTTTGCAAG TAGCGGTGGT GTCGGTATTC CGGGGTTGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

ppp:PHYPADRAFT_111967

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000143	Aegilops tauschii	47.08	0.00e+00	711.00
IUUC-Atr-002916	Amborella trichopoda	50.00	0.00e+00	741.00
IUUC-Aly-005480	Arabidopsis lyrata	45.34	0.00e+00	645.00
IUUC-Ath-007569	Arabidopsis thaliana	45.47	0.00e+00	639.00
IUUC-Bdi-014487	Brachypodium distachyon	47.72	0.00e+00	710.00
IUUC-Bol-015955	Brassica oleracea	43.32	1.00e-173	602.00
IUUC-Bra-017841	Brassica rapa	45.01	2.00e-178	618.00
IUUC-Gma-044318	Glycine max	50.98	0.00e+00	778.00
IUUC-Hvu-047783	Hordeum vulgare	47.77	0.00e+00	714.00
IUUC-Lpe-050971	Leersia perrieri	49.24	0.00e+00	690.00
IUUC-Mtr-058511	Medicago truncatula	50.25	0.00e+00	771.00
IUUC-Mac-064911	Musa acuminata	46.70	0.00e+00	664.00
IUUC-Oba-075225	Oryza barthii	49.24	0.00e+00	717.00
IUUC-Obr-076103	Oryza brachyantha	48.86	0.00e+00	684.00
IUUC-Ogl-077529	Oryza glaberrima	49.24	0.00e+00	715.00
IUUC-Ogu-078735	Oryza glumaepatula	49.24	0.00e+00	716.00
IUUC-Oin-079422	Oryza indica	49.43	0.00e+00	714.00
IUUC-Olo-080644	Oryza longistaminata	44.56	2.00e-177	615.00
IUUC-Ome-081455	Oryza meridionalis	49.30	0.00e+00	715.00
IUUC-Oni-082690	Oryza nivara	49.56	0.00e+00	714.00
IUUC-Opu-083157	Oryza punctata	49.24	0.00e+00	714.00
IUUC-Oru-085058	Oryza rufipogon	49.43	0.00e+00	714.00
IUUC-Osa-086000	Oryza sativa	49.43	0.00e+00	714.00
IUUC-Pop-099966	Populus trichocarpa	49.69	0.00e+00	736.00
IUUC-Ppe-101973	Prunus persica	48.90	0.00e+00	750.00
IUUC-Smo-109219	Selaginella moellendorffii	56.69	0.00e+00	867.00
IUUC-Sit-110490	Setaria italica	48.35	0.00e+00	687.00
IUUC-Sly-111702	Solanum lycopersicum	50.91	0.00e+00	686.00
IUUC-Stu-111962	Solanum tuberosum	50.06	0.00e+00	736.00
IUUC-Sbi-113974	Sorghum bicolor	44.36	9.00e-169	586.00
IUUC-Tca-121113	Theobroma cacao	50.74	0.00e+00	767.00
IUUC-Tae-125341	Triticum aestivum	43.62	2.00e-162	565.00
IUUC-Tur-126573	Triticum urartu	48.35	0.00e+00	714.00
IUUC-Vvi-131623	Vitis vinifera	50.74	0.00e+00	795.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence