iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mga-059656

Ensembl Protein ID

ENSMGAP00000015860.2

UniProt Accession

G1NQ11; G1NQ11_MELGA

Protein Name

Uncharacterized protein

Gene Name

TDRD3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMGAG00000014961.2	ENSMGAT00000016824.2	ENSMGAP00000015860.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.10e-09	37.9	286	323

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           de +l  ++eMGF++e+a+qaL +++nnleaA+++Ll+
   Q: 286  DEKALKHITEMGFSKEAARQALMDNSNNLEAALNFLLN 323
           78999*******************************97 PP

Organism

Meleagris gallopavo

Protein Sequence
(Fasta)

EIGGKLFCSL GKYLSDEGIE TCINSSEKVN TNDIILVALN TDLRTIGKKF LPSDINGGKV 60
EKLEGPCVLQ IQKIRNVSAP KDNEESQAAP RMLRLQMTDG HTSCTAIEYN SMSKISLNTP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAATAGGAG GCAAATTGAG TAACAAATGT CACAGTCTCT AACTACTCAA GTAAAAATTA 60
CATTCTCTCT AAGTGTTTTT GAACATGAGA ATGCATCAGC CCTTCTAAAT TGATTATGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR033472--DUF1767
IPR013894--RMI1_N
IPR010304--Survival_motor_neuron
IPR002999--Tudor
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50304--TUDOR
PS50030--UBA

Pfam

PF08585--RMI1_N
PF06003--SMN
PF00627--UBA

SMART

SM01161--DUF1767
SM00333--TUDOR
SM00165--UBA

Gene Ontology

GO:0005737--C:cytoplasm
GO:0035145--C:exon-exon junction complex
GO:0003682--F:chromatin binding
GO:0003723--F:RNA binding
GO:0003713--F:transcription coactivator activity
GO:0006397--P:mRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000323	Aegilops tauschii	35.71	1.00e-16	80.10
IUUC-Aml-001751	Ailuropoda melanoleuca	75.89	0.00e+00	1035.00
IUUC-Atr-002788	Amborella trichopoda	33.54	2.00e-21	96.70
IUUC-Apl-004055	Anas platyrhynchos	92.76	0.00e+00	1181.00
IUUC-Aca-004367	Anolis carolinensis	76.81	0.00e+00	1071.00
IUUC-Aly-006072	Arabidopsis lyrata	36.31	4.00e-24	105.00
IUUC-Ath-007491	Arabidopsis thaliana	35.67	1.00e-23	103.00
IUUC-Ame-011439	Astyanax mexicanus	68.67	9.00e-109	387.00
IUUC-Bta-012894	Bos taurus	71.91	0.00e+00	996.00
IUUC-Bdi-014462	Brachypodium distachyon	32.58	3.00e-21	95.90
IUUC-Bol-015343	Brassica oleracea	36.36	3.00e-23	102.00
IUUC-Bra-016787	Brassica rapa	36.48	6.00e-23	101.00
IUUC-Cel-018154	Caenorhabditis elegans	37.73	5.00e-29	122.00
IUUC-Cja-019364	Callithrix jacchus	74.12	0.00e+00	899.00
IUUC-Cfa-021166	Canis familiaris	75.71	0.00e+00	1023.00
IUUC-Cpo-021678	Cavia porcellus	66.45	0.00e+00	736.00
IUUC-Csa-023299	Chlorocebus sabaeus	74.19	0.00e+00	1074.00
IUUC-Cho-024694	Choloepus hoffmanni	85.71	5.00e-125	441.00
IUUC-Cin-025191	Ciona intestinalis	43.23	3.00e-44	171.00
IUUC-Csv-026348	Ciona savignyi	49.02	4.00e-11	59.30
IUUC-Dre-028715	Danio rerio	49.80	4.00e-162	564.00
IUUC-Dno-030091	Dasypus novemcinctus	75.10	0.00e+00	1046.00
IUUC-Dor-030807	Dipodomys ordii	64.78	0.00e+00	741.00
IUUC-Dme-031770	Drosophila melanogaster	33.51	2.00e-42	167.00
IUUC-Ete-032507	Echinops telfairi	54.82	3.00e-144	504.00
IUUC-Eca-033406	Equus caballus	72.99	0.00e+00	791.00
IUUC-Eeu-034600	Erinaceus europaeus	68.71	0.00e+00	777.00
IUUC-Fca-035916	Felis catus	76.50	0.00e+00	1040.00
IUUC-Fal-036658	Ficedula albicollis	90.11	0.00e+00	1240.00
IUUC-Gmo-038974	Gadus morhua	61.44	2.00e-100	359.00
IUUC-Gga-040195	Gallus gallus	97.26	0.00e+00	1369.00
IUUC-Gac-042537	Gasterosteus aculeatus	47.01	2.00e-163	569.00
IUUC-Gma-044234	Glycine max	39.35	9.00e-24	104.00
IUUC-Ggo-044715	Gorilla gorilla	72.82	0.00e+00	915.00
IUUC-Hsa-045814	Homo sapiens	74.60	0.00e+00	1077.00
IUUC-Hvu-047365	Hordeum vulgare	32.22	3.00e-17	82.80
IUUC-Itr-047866	Ictidomys tridecemlineatus	75.00	0.00e+00	1040.00
IUUC-Kpa-049313	Komagataella pastoris	28.57	3.00e-03	36.60
IUUC-Lch-050393	Latimeria chalumnae	62.70	0.00e+00	796.00
IUUC-Lpe-050691	Leersia perrieri	35.06	1.00e-21	97.10
IUUC-Loc-052859	Lepisosteus oculatus	56.22	0.00e+00	681.00
IUUC-Laf-053953	Loxodonta africana	70.81	0.00e+00	635.00
IUUC-Mcc-055846	Macaca mulatta	74.56	0.00e+00	1066.00
IUUC-Meu-056790	Macropus eugenii	63.71	0.00e+00	775.00
IUUC-Mtr-058749	Medicago truncatula	40.13	4.00e-21	95.10
IUUC-Mla-058959	Melampsora laricipopulina	45.59	2.00e-08	53.10
IUUC-Mmr-061089	Microcebus murinus	73.33	0.00e+00	973.00
IUUC-Mdo-063043	Monodelphis domestica	63.94	0.00e+00	672.00
IUUC-Mmu-063654	Mus musculus	69.49	0.00e+00	949.00
IUUC-Mac-064947	Musa acuminata	37.29	1.00e-19	90.50
IUUC-Mpu-066115	Mustela putorius furo	73.94	0.00e+00	811.00
IUUC-Mlu-066974	Myotis lucifugus	71.23	0.00e+00	916.00
IUUC-Nle-069184	Nomascus leucogenys	74.73	0.00e+00	1084.00
IUUC-Opr-070770	Ochotona princeps	65.08	0.00e+00	774.00
IUUC-Ont-072040	Oreochromis niloticus	48.97	7.00e-178	617.00
IUUC-Oan-073448	Ornithorhynchus anatinus	82.74	3.00e-65	240.00
IUUC-Ocu-074405	Oryctolagus cuniculus	74.73	0.00e+00	1044.00
IUUC-Oba-075977	Oryza barthii	30.73	5.00e-15	74.70
IUUC-Obr-076298	Oryza brachyantha	30.57	1.00e-19	90.90
IUUC-Ogl-077706	Oryza glaberrima	31.28	4.00e-15	75.50
IUUC-Ogu-078381	Oryza glumaepatula	30.73	9.00e-16	77.40
IUUC-Oin-080150	Oryza indica	31.28	2.00e-15	76.30
IUUC-Ome-081153	Oryza meridionalis	28.51	5.00e-15	75.10
IUUC-Oni-083115	Oryza nivara	30.73	6.00e-15	74.30
IUUC-Opu-083860	Oryza punctata	30.16	1.00e-19	90.50
IUUC-Oru-084859	Oryza rufipogon	31.28	5.00e-15	75.10
IUUC-Osa-085567	Oryza sativa	31.28	7.00e-14	71.20
IUUC-Ola-087049	Oryzias latipes	48.44	3.00e-169	588.00
IUUC-Olu-087599	Ostreococcus lucimarinus	34.88	2.90e-02	32.30
IUUC-Oga-088455	Otolemur garnettii	74.33	0.00e+00	1040.00
IUUC-Oar-090096	Ovis aries	75.58	0.00e+00	1053.00
IUUC-Ptr-090974	Pan troglodytes	73.66	0.00e+00	933.00
IUUC-Pan-092657	Papio anubis	74.06	0.00e+00	1077.00
IUUC-Psi-093113	Pelodiscus sinensis	82.64	0.00e+00	1028.00
IUUC-Ppa-095466	Physcomitrella patens	39.31	1.00e-24	107.00
IUUC-Pfo-096631	Poecilia formosa	47.85	3.00e-167	581.00
IUUC-Pab-098070	Pongo abelii	75.41	0.00e+00	1072.00
IUUC-Pop-099235	Populus trichocarpa	36.67	6.00e-22	98.60
IUUC-Pca-101032	Procavia capensis	67.33	0.00e+00	826.00
IUUC-Ppe-101793	Prunus persica	32.26	2.00e-23	103.00
IUUC-Pva-102290	Pteropus vampyrus	73.35	0.00e+00	906.00
IUUC-Rno-105080	Rattus norvegicus	69.02	0.00e+00	784.00
IUUC-Sha-107598	Sarcophilus harrisii	73.43	0.00e+00	1026.00
IUUC-Sit-110735	Setaria italica	29.61	7.00e-19	87.80
IUUC-Sly-111126	Solanum lycopersicum	40.79	6.00e-21	94.70
IUUC-Stu-112780	Solanum tuberosum	40.40	2.00e-23	102.00
IUUC-Sar-113418	Sorex araneus	73.35	0.00e+00	880.00
IUUC-Sbi-113925	Sorghum bicolor	31.28	1.00e-20	93.60
IUUC-Ssc-115712	Sus scrofa	75.30	0.00e+00	1063.00
IUUC-Tgu-117148	Taeniopygia guttata	90.67	0.00e+00	1274.00
IUUC-Tru-117831	Takifugu rubripes	48.73	2.00e-173	602.00
IUUC-Tsy-118917	Tarsius syrichta	71.36	0.00e+00	834.00
IUUC-Tni-120783	Tetraodon nigroviridis	46.58	5.00e-166	577.00
IUUC-Tca-121430	Theobroma cacao	36.25	6.00e-08	51.60
IUUC-Tae-123752	Triticum aestivum	35.71	1.00e-16	80.50
IUUC-Tur-126238	Triticum urartu	33.33	8.00e-16	77.80
IUUC-Ttr-128615	Tursiops truncatus	68.25	0.00e+00	804.00
IUUC-Vpa-130531	Vicugna pacos	75.04	0.00e+00	916.00
IUUC-Vvi-131607	Vitis vinifera	39.74	4.00e-18	85.50
IUUC-Xtr-132787	Xenopus tropicalis	61.52	0.00e+00	773.00
IUUC-Xma-133815	Xiphophorus maculatus	47.85	4.00e-165	574.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence