iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000009003.2	ENSCJAT00000017483.2	ENSCJAP00000016534.2
ENSCJAG00000009003.2	ENSCJAT00000017503.2	ENSCJAP00000016554.2
ENSCJAG00000009003.2	ENSCJAT00000017493.1	ENSCJAP00000016544.1
ENSCJAG00000009003.2	ENSCJAT00000017488.2	ENSCJAP00000016539.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/GAT	2.90e-27	96.2	199	288
UBD/Alpha-Helix/VHS	1.30e-44	152.3	2	134

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/GAT

   S: 37   kaekikkliseleevksnvkllnemlselspegeepednellqelyetckaarpkllklieeeedndellaellkanDelnqvlnkykq 125
            +e+i +l+sel+ v++n+k+++eml+e++p++e+++d ellqel++tc+a+++++++li++ ++n+e+++ell++nD+ln+v+++y++
   Q: 199  SSEQIARLRSELDVVRGNTKVMSEMLTEMVPGQEDSSDLELLQELNRTCRAMQQRIVELISR-VSNEEVTEELLHVNDDLNNVFLRYER 286
           689***********************************************************.*************************9 PP
   S: 126  lk 127
           ++
   Q: 287  FE 288
           97 PP

UBD/Alpha-Helix/VHS

   S: 1    atselvtsedwelileicdliqetkegakdalralrkri.nnknphvalraLtlLdscvsnCgkkfhvevaskdllee..lrell.kne 85
           at+ +++sedw+l++eicd+i+et+eg+kda+ral+kr+ +n+n  ++++aLt+L++cv+nCg++fh +va++d++++  ++ +  kn+
   Q: 2    ATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLnGNRNYREVMLALTVLETCVKNCGHRFHILVANRDFIDSvlVKIISpKNN 90
           68999**********************************779***********************************985666669999 PP
   S: 86   nepkvieKlkalivsWadelknepalslivaliktlkeeGlefp 129
           +++ v +K + + ++Wad+++++p+l+++v+++++lk++G+efp
   Q: 91   PPTIVQDKSLLFSQAWADAFRSSPDLTGVVHIYEELKRKGVEFP 134
           9******************************************8 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

KATDGSLQSE DWTLNMEICD IINETEEGPK DAIRALKKRL NGNRNYREVM LALTVLETCV 60
KNCGHRFHIL VANRDFIDSV LVKIISPKNN PPTIVQDKSL LFSQAWADAF RSSPDLTGVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTAGGACTG GATCCCGGCG GGGTACAGCG GAGACTTCTG TGGCAGACAG GGGCCCCGGG 60
CCGCTGTGTG TTGTCCACCG AAGATGGAGT TCCTCCTGGG GAACCCGTTC AGCACCCGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0813--Transport

Interpro

IPR008942--ENTH_VHS
IPR004152--GAT_dom
IPR014645--TOM1
IPR027429--TOM1L2
IPR002014--VHS_dom

PROSITE

PS50909--GAT
PS50179--VHS

Pfam

PF03127--GAT
PF00790--VHS

SMART

SM00288--VHS

Gene Ontology

GO:0070062--C:extracellular exosome
GO:0005622--C:intracellular
GO:0006886--P:intracellular protein transport
GO:0045839--P:negative regulation of mitotic nuclear division
GO:0007165--P:signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002171	Ailuropoda melanoleuca	97.96	0.00e+00	840.00
IUUC-Atr-003138	Amborella trichopoda	30.77	3.00e-24	106.00
IUUC-Apl-003931	Anas platyrhynchos	89.59	0.00e+00	779.00
IUUC-Aca-004547	Anolis carolinensis	66.80	5.00e-152	531.00
IUUC-Aly-005656	Arabidopsis lyrata	31.82	3.00e-33	136.00
IUUC-Ath-007359	Arabidopsis thaliana	32.01	2.00e-31	130.00
IUUC-Ame-011059	Astyanax mexicanus	66.14	3.00e-175	608.00
IUUC-Bta-012995	Bos taurus	89.37	0.00e+00	780.00
IUUC-Bdi-015001	Brachypodium distachyon	30.42	6.00e-28	119.00
IUUC-Bol-015832	Brassica oleracea	32.12	2.00e-32	134.00
IUUC-Bra-017805	Brassica rapa	32.12	2.00e-32	134.00
IUUC-Cel-018158	Caenorhabditis elegans	49.07	2.00e-79	289.00
IUUC-Cfa-020935	Canis familiaris	91.60	0.00e+00	816.00
IUUC-Cpo-021763	Cavia porcellus	92.84	0.00e+00	804.00
IUUC-Csa-023899	Chlorocebus sabaeus	92.86	0.00e+00	842.00
IUUC-Dre-028784	Danio rerio	68.31	0.00e+00	657.00
IUUC-Dno-029588	Dasypus novemcinctus	90.39	0.00e+00	749.00
IUUC-Dor-030371	Dipodomys ordii	81.78	4.00e-177	613.00
IUUC-Dme-032144	Drosophila melanogaster	42.00	3.00e-90	325.00
IUUC-Eca-033664	Equus caballus	96.52	0.00e+00	846.00
IUUC-Eeu-035062	Erinaceus europaeus	75.49	1.00e-178	619.00
IUUC-Fca-036096	Felis catus	96.13	0.00e+00	851.00
IUUC-Fal-036951	Ficedula albicollis	86.16	0.00e+00	756.00
IUUC-Gmo-038942	Gadus morhua	60.90	3.00e-155	541.00
IUUC-Gga-040378	Gallus gallus	90.80	0.00e+00	773.00
IUUC-Gac-042242	Gasterosteus aculeatus	70.16	0.00e+00	676.00
IUUC-Gma-043428	Glycine max	31.17	5.00e-32	132.00
IUUC-Ggo-045180	Gorilla gorilla	98.57	0.00e+00	859.00
IUUC-Hsa-045697	Homo sapiens	98.57	0.00e+00	859.00
IUUC-Hvu-047560	Hordeum vulgare	30.10	5.00e-29	121.00
IUUC-Itr-048308	Ictidomys tridecemlineatus	81.35	0.00e+00	749.00
IUUC-Lch-049647	Latimeria chalumnae	81.19	0.00e+00	743.00
IUUC-Lpe-051451	Leersia perrieri	31.72	4.00e-29	123.00
IUUC-Loc-052081	Lepisosteus oculatus	80.16	0.00e+00	760.00
IUUC-Laf-053664	Loxodonta africana	83.03	0.00e+00	732.00
IUUC-Mcc-055637	Macaca mulatta	93.05	0.00e+00	843.00
IUUC-Meu-056014	Macropus eugenii	77.10	0.00e+00	672.00
IUUC-Mtr-058035	Medicago truncatula	29.90	2.00e-29	124.00
IUUC-Mga-060056	Meleagris gallopavo	84.49	0.00e+00	692.00
IUUC-Mmr-060929	Microcebus murinus	92.84	0.00e+00	777.00
IUUC-Mdo-061814	Monodelphis domestica	88.14	0.00e+00	826.00
IUUC-Mmu-063996	Mus musculus	93.25	0.00e+00	834.00
IUUC-Mac-064731	Musa acuminata	30.66	1.00e-30	129.00
IUUC-Mpu-065820	Mustela putorius furo	95.09	0.00e+00	833.00
IUUC-Nle-069131	Nomascus leucogenys	98.10	0.00e+00	825.00
IUUC-Opr-070780	Ochotona princeps	86.92	0.00e+00	690.00
IUUC-Ont-072357	Oreochromis niloticus	69.17	0.00e+00	635.00
IUUC-Oan-072790	Ornithorhynchus anatinus	89.97	2.00e-172	598.00
IUUC-Ocu-074458	Oryctolagus cuniculus	89.24	0.00e+00	720.00
IUUC-Oba-075564	Oryza barthii	31.36	8.00e-30	125.00
IUUC-Obr-076278	Oryza brachyantha	31.82	2.00e-31	130.00
IUUC-Ogl-077758	Oryza glaberrima	31.36	8.00e-30	125.00
IUUC-Ogu-078839	Oryza glumaepatula	31.36	7.00e-30	125.00
IUUC-Oin-079919	Oryza indica	31.36	8.00e-30	125.00
IUUC-Olo-080861	Oryza longistaminata	29.28	1.00e-28	121.00
IUUC-Ome-081795	Oryza meridionalis	32.17	1.00e-30	127.00
IUUC-Oni-082061	Oryza nivara	32.17	2.00e-30	127.00
IUUC-Opu-083285	Oryza punctata	32.76	1.00e-31	131.00
IUUC-Oru-084640	Oryza rufipogon	31.36	7.00e-30	125.00
IUUC-Osa-085855	Oryza sativa	31.36	8.00e-30	125.00
IUUC-Ola-087001	Oryzias latipes	68.64	7.00e-177	613.00
IUUC-Oga-088302	Otolemur garnettii	95.50	0.00e+00	818.00
IUUC-Ptr-091081	Pan troglodytes	98.16	0.00e+00	852.00
IUUC-Pan-092566	Papio anubis	93.05	0.00e+00	843.00
IUUC-Psi-093744	Pelodiscus sinensis	90.18	0.00e+00	769.00
IUUC-Pma-094514	Petromyzon marinus	63.16	2.00e-121	428.00
IUUC-Ppa-095533	Physcomitrella patens	32.88	6.00e-30	125.00
IUUC-Pfo-096489	Poecilia formosa	69.58	0.00e+00	629.00
IUUC-Pab-098769	Pongo abelii	92.66	0.00e+00	840.00
IUUC-Pop-099695	Populus trichocarpa	30.56	1.00e-30	128.00
IUUC-Ppe-101305	Prunus persica	30.20	2.00e-31	130.00
IUUC-Pva-102889	Pteropus vampyrus	83.44	0.00e+00	695.00
IUUC-Rno-105379	Rattus norvegicus	90.00	0.00e+00	823.00
IUUC-Smo-109345	Selaginella moellendorffii	30.99	4.00e-20	92.00
IUUC-Sit-109878	Setaria italica	32.17	2.00e-30	127.00
IUUC-Sly-111006	Solanum lycopersicum	29.76	9.00e-31	128.00
IUUC-Stu-112728	Solanum tuberosum	26.71	2.00e-11	63.20
IUUC-Sbi-114813	Sorghum bicolor	31.52	2.00e-33	137.00
IUUC-Tgu-116705	Taeniopygia guttata	90.39	0.00e+00	770.00
IUUC-Tru-117717	Takifugu rubripes	69.74	0.00e+00	637.00
IUUC-Tsy-119063	Tarsius syrichta	87.05	0.00e+00	678.00
IUUC-Tni-120164	Tetraodon nigroviridis	55.20	1.00e-125	442.00
IUUC-Tca-121503	Theobroma cacao	31.21	1.00e-29	124.00
IUUC-Tae-124026	Triticum aestivum	32.06	1.00e-26	115.00
IUUC-Tur-126378	Triticum urartu	27.69	9.00e-25	108.00
IUUC-Tbe-128123	Tupaia belangeri	82.46	2.00e-164	572.00
IUUC-Vvi-131122	Vitis vinifera	30.42	7.00e-30	125.00
IUUC-Xtr-132682	Xenopus tropicalis	80.69	0.00e+00	754.00
IUUC-Xma-134041	Xiphophorus maculatus	66.73	5.00e-175	607.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence