iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0010s25940	POPTR_0010s25940.4	POPTR_0010s25940.4
POPTR_0010s25940	POPTR_0010s25940.1	POPTR_0010s25940.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	72.18	1.00e-103	372.00	IUUC-Oin-080134

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MQLVSNDSRK EDISESEPIL SHSNISQHSE EESPSSLEIK SLGRDCEIHV DDSESIQIDE 60
TCHLVNPDHP QCRICLDNEG EDLIAPCHCK GTQKYVHRSC LDNWRSTKEG FAFAHCTECR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCTCTCTCT CTCTCAGCAC TGACTTGACA ATATACAAGA AAACCCTAAA AACAAAAAAA 60
ATCTCTAATC TTTGCAAACT CTCAAATGAA TGCAGTTATG CTTTGCTAAA TATCAGGTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR033275--MARCH-like
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51292--ZF_RING_CH

Pfam

PF12906--RINGv

SMART

SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0010s25940g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000798	Aegilops tauschii	66.54	1.00e-82	299.00
IUUC-Atr-002775	Amborella trichopoda	65.99	2.00e-97	347.00
IUUC-Ani-009440	Aspergillus nidulans	36.54	3.00e-05	41.60
IUUC-Ang-009870	Aspergillus niger	25.71	8.00e-07	47.40
IUUC-Bdi-014004	Brachypodium distachyon	80.61	2.00e-87	315.00
IUUC-Bol-015895	Brassica oleracea	71.43	7.00e-96	342.00
IUUC-Bra-018016	Brassica rapa	71.43	4.00e-95	340.00
IUUC-Cel-018164	Caenorhabditis elegans	31.19	2.00e-07	49.70
IUUC-Cin-025794	Ciona intestinalis	34.33	6.00e-11	60.10
IUUC-Cgl-026475	Colletotrichum gloeosporioides	29.00	2.00e-06	45.80
IUUC-Cne-027028	Cryptococcus neoformans	34.88	6.00e-10	57.80
IUUC-Fso-038329	Fusarium solani	40.82	9.00e-07	47.00
IUUC-Ggr-039944	Gaeumannomyces graminis	35.00	4.00e-07	48.50
IUUC-Gma-044393	Glycine max	79.15	4.00e-113	399.00
IUUC-Hvu-047111	Hordeum vulgare	67.68	4.00e-87	313.00
IUUC-Lpe-051137	Leersia perrieri	79.90	2.00e-102	364.00
IUUC-Lma-053268	Leptosphaeria maculans	36.73	3.00e-06	45.10
IUUC-Meu-056185	Macropus eugenii	31.15	1.00e-05	43.10
IUUC-Mor-056968	Magnaporthe oryzae	24.49	5.00e-08	51.60
IUUC-Mpo-057421	Magnaporthe poae	40.74	2.00e-06	45.80
IUUC-Mtr-057881	Medicago truncatula	89.29	6.00e-107	379.00
IUUC-Mvi-060405	Microbotryum violaceum	43.10	8.00e-09	54.70
IUUC-Mac-065259	Musa acuminata	71.71	2.00e-104	371.00
IUUC-Ncr-068689	Neurospora crassa	47.06	3.00e-07	48.50
IUUC-Oba-075340	Oryza barthii	53.51	5.00e-70	256.00
IUUC-Obr-076417	Oryza brachyantha	67.92	2.00e-102	364.00
IUUC-Ogl-077311	Oryza glaberrima	67.90	4.00e-103	367.00
IUUC-Ogu-078495	Oryza glumaepatula	71.49	7.00e-91	326.00
IUUC-Oin-080134	Oryza indica	77.38	1.00e-102	365.00
IUUC-Olo-080327	Oryza longistaminata	60.18	4.00e-70	256.00
IUUC-Ome-081608	Oryza meridionalis	72.86	2.00e-25	107.00
IUUC-Oni-082799	Oryza nivara	59.73	7.00e-70	256.00
IUUC-Opu-084134	Oryza punctata	60.18	2.00e-70	258.00
IUUC-Oru-084834	Oryza rufipogon	59.73	2.00e-69	255.00
IUUC-Osa-085741	Oryza sativa	67.90	4.00e-103	367.00
IUUC-Olu-087713	Ostreococcus lucimarinus	40.00	9.00e-07	47.00
IUUC-Ppe-101927	Prunus persica	79.62	1.00e-120	425.00
IUUC-Pgr-103682	Puccinia graminis	35.94	5.00e-07	48.90
IUUC-Pyt-104598	Pyrenophora triticirepentis	28.00	4.00e-06	44.70
IUUC-Smo-109092	Selaginella moellendorffii	66.14	1.00e-60	225.00
IUUC-Sit-110458	Setaria italica	67.92	4.00e-99	353.00
IUUC-Sly-111179	Solanum lycopersicum	72.16	2.00e-77	281.00
IUUC-Stu-112143	Solanum tuberosum	75.98	9.00e-98	348.00
IUUC-Sbi-113840	Sorghum bicolor	64.44	1.00e-97	348.00
IUUC-Sre-115202	Sporisorium reilianum	45.16	2.00e-09	57.40
IUUC-Tca-121093	Theobroma cacao	84.17	9.00e-125	438.00
IUUC-Tvi-122666	Trichoderma virens	27.45	8.00e-07	47.40
IUUC-Tae-124221	Triticum aestivum	64.91	2.00e-82	298.00
IUUC-Tur-126784	Triticum urartu	67.72	3.00e-83	301.00
IUUC-Vvi-131321	Vitis vinifera	81.85	6.00e-122	429.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence