iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115592

Ensembl Protein ID

ENSSSCP00000013302.2

UniProt Accession

F1RYG9; F1RYG9_PIG

Genbank Protein ID

ENSSSCP00000013302

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

Gene Name

ARMCX3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000012509.3	ENSSSCT00000034007.1	ENSSSCP00000029892.1
ENSSSCG00000012509.3	ENSSSCT00000013678.2	ENSSSCP00000013302.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/U-box	20.45	6.00e-05	45.10	IUUC-Osa-085662

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sus scrofa

Protein Sequence
(Fasta)

MGYARKVGWV TAGLVIGAGA CYCIYRLTRG RKQNKEKMAE GGSGDVDDVG DCPGARYNDW 60
SDDDDDNSEN KGIVWYPPWA RIGTEAGTRA RARARARATR ARRAVQKRAS PNSDDTVLSP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACGTGACCAA GAGCTGACGT GTGCAGAAGT CCTTCTTGTT CTGGTCGTTG TTCCCCGTCT 60
GAGTACCAGC TCCCCACTGC CCTGAGGGTG AGCGGGCCGG TGGCAGAGGG AAGGAGGAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR011989--ARM-like
IPR006911--ARM-rpt_dom
IPR016024--ARM-type_fold
IPR000225--Armadillo

PROSITE

PS50176--ARM_REPEAT

Pfam

PF04826--Arm_2

Gene Ontology

GO:0016021--C:integral component of membrane

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001129	Aegilops tauschii	23.41	1.00e-06	48.50
IUUC-Bdi-014675	Brachypodium distachyon	23.30	5.00e-08	52.80
IUUC-Hvu-047822	Hordeum vulgare	22.77	1.00e-06	48.50
IUUC-Lpe-051105	Leersia perrieri	21.02	2.00e-06	47.40
IUUC-Oba-075480	Oryza barthii	20.45	5.00e-06	45.40
IUUC-Ogl-077156	Oryza glaberrima	20.45	8.00e-06	45.40
IUUC-Ogu-078640	Oryza glumaepatula	20.45	7.00e-06	45.80
IUUC-Olo-080903	Oryza longistaminata	20.45	5.00e-06	45.80
IUUC-Ome-081982	Oryza meridionalis	20.45	6.00e-06	45.80
IUUC-Oni-082824	Oryza nivara	20.45	7.00e-06	45.80
IUUC-Opu-083758	Oryza punctata	20.45	5.00e-06	46.20
IUUC-Oru-084718	Oryza rufipogon	20.45	7.00e-06	45.80
IUUC-Osa-085662	Oryza sativa	20.45	6.00e-06	45.40
IUUC-Sit-110022	Setaria italica	21.39	6.00e-07	49.30
IUUC-Sbi-114100	Sorghum bicolor	21.59	7.00e-07	48.90
IUUC-Tae-124437	Triticum aestivum	23.27	2.00e-06	47.40
IUUC-Tur-126627	Triticum urartu	23.27	1.00e-06	48.10

Created Date

25-Jun-2017