iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121543

Ensembl Protein ID

EOY19962

UniProt Accession

A0A061FT80; A0A061FT80_THECC

Genbank Protein ID

EOY19962.1

Protein Name

F-box and associated interaction domains-containing protein

Genbank Nucleotide ID

CM001888

Gene Name

TCM_045363

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_045363	EOY19962	EOY19962

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	1.80e-06	29.0	6	42

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 102  lldrlpeeilveilklldkeellraarvcrrwqelas 138
           + ++lpe +++eil +l+ ++l+r+++vc++w    +
   Q: 6    TDKELPETLVMEILLRLPVKSLMRFKCVCKSWCSSFQ 42
           5689****************************86555 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSMPITDKEL PETLVMEILL RLPVKSLMRF KCVCKSWCSS FQTSYFITNH KNDNLNLLFK 60
GFFGGFKVPH LSLLSTETES MKHGGPNVEF NLKIKENIRM PVSICSGSRS RLTVSGVCNG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCGATCGACA TTCATTATCC GAAATGTCAA CCGAAATCCC GCAAGGCTTT AATATCAACT 60
TCTCATTTTC CCTGTGGGTA ACTGTTTCCA AATACCACAT TCTAAAAGAT TTTAAACTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR017451--F-box-assoc_interact_dom
IPR001810--F-box_dom
IPR015915--Kelch-typ_b-propeller

Pfam

PF00646--F-box

SMART

SM00256--FBOX

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000127	Aegilops tauschii	23.17	9.00e-16	78.20
IUUC-Bdi-014683	Brachypodium distachyon	22.02	7.00e-15	75.50
IUUC-Lpe-051032	Leersia perrieri	19.04	2.00e-14	73.90
IUUC-Oba-075410	Oryza barthii	21.57	6.00e-16	79.00
IUUC-Ogl-077729	Oryza glaberrima	21.57	4.00e-16	79.30
IUUC-Ogu-077953	Oryza glumaepatula	21.57	9.00e-16	78.20
IUUC-Olo-080966	Oryza longistaminata	20.90	7.00e-17	82.00
IUUC-Oni-082495	Oryza nivara	21.57	6.00e-16	79.00
IUUC-Oru-084884	Oryza rufipogon	21.57	6.00e-16	79.00
IUUC-Osa-085690	Oryza sativa	21.57	6.00e-16	79.00
IUUC-Sit-110556	Setaria italica	23.15	2.00e-22	100.00
IUUC-Sbi-113893	Sorghum bicolor	22.54	8.00e-23	101.00
IUUC-Tae-124805	Triticum aestivum	22.12	2.00e-22	100.00
IUUC-Zma-134829	Zea mays	27.67	4.00e-06	45.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence