iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114275

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G138300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g012070	Sb01g012070.1	Sb01g012070.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.30e-06	27.2	24	65

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+e +++ p+v+ CgH+f+  Cl++w ++      +  CP+C+
   Q: 24   CNICFELPQE-PIVTLCGHLFCWPCLYRW-LHI--HAHSPECPVCK 65
           99******99.999***************.444..677888****6 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSANVDESTS GGSSSDAAGG SFECNICFEL PQEPIVTLCG HLFCWPCLYR WLHIHAHSPE 60
CPVCKALVEE DKLVPLYGRG KDRVDPRSKN MPEGEIPHRP TGQRPATAPQ ADANNFANAN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAAAAAACA AAACAAAAAC AAAAAAAGGG TCGCCCCAGC CTCTCGTCTC TCCCCAAGCG 60
GCGGCGACCA GGCCGACGGC CCTCCGCAGG CGGTGCACCG GCGGTATAGG TGCTCACCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0016021--C:integral component of membrane
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_01g012070

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001417	Ailuropoda melanoleuca	54.02	1.00e-23	102.00
IUUC-Aca-004254	Anolis carolinensis	50.57	6.00e-22	95.50
IUUC-Ath-007401	Arabidopsis thaliana	51.18	2.00e-45	174.00
IUUC-Bta-013109	Bos taurus	52.87	3.00e-23	100.00
IUUC-Bdi-014313	Brachypodium distachyon	83.98	5.00e-87	312.00
IUUC-Cel-018228	Caenorhabditis elegans	46.67	2.00e-25	108.00
IUUC-Cja-019136	Callithrix jacchus	51.39	1.00e-20	92.00
IUUC-Cfa-020079	Canis familiaris	53.41	4.00e-24	103.00
IUUC-Cpo-021347	Cavia porcellus	51.39	1.00e-20	92.00
IUUC-Csa-023595	Chlorocebus sabaeus	54.02	7.00e-24	102.00
IUUC-Cme-027164	Cyanidioschyzon merolae	58.46	1.00e-21	95.90
IUUC-Dre-028094	Danio rerio	51.39	1.00e-20	91.70
IUUC-Dno-029402	Dasypus novemcinctus	51.39	1.00e-20	92.00
IUUC-Dor-030170	Dipodomys ordii	55.17	5.00e-24	102.00
IUUC-Ete-032786	Echinops telfairi	51.39	8.00e-21	92.40
IUUC-Eca-033642	Equus caballus	53.85	4.00e-25	106.00
IUUC-Fca-036326	Felis catus	54.02	4.00e-24	103.00
IUUC-Fal-037085	Ficedula albicollis	52.11	1.00e-20	91.70
IUUC-Gmo-039369	Gadus morhua	51.35	7.00e-22	95.90
IUUC-Gga-040514	Gallus gallus	51.39	1.00e-20	91.70
IUUC-Ggo-045474	Gorilla gorilla	54.02	7.00e-24	102.00
IUUC-Hsa-046046	Homo sapiens	54.02	8.00e-24	102.00
IUUC-Itr-048037	Ictidomys tridecemlineatus	53.85	6.00e-25	105.00
IUUC-Lch-050658	Latimeria chalumnae	51.39	1.00e-20	91.70
IUUC-Lpe-050977	Leersia perrieri	88.26	2.00e-88	317.00
IUUC-Laf-053395	Loxodonta africana	54.02	1.00e-23	102.00
IUUC-Mcc-054833	Macaca mulatta	54.02	7.00e-24	102.00
IUUC-Mpo-057628	Magnaporthe poae	37.74	9.00e-08	50.80
IUUC-Mla-059070	Melampsora laricipopulina	50.00	8.00e-08	49.70
IUUC-Mga-059554	Meleagris gallopavo	51.39	1.00e-20	91.70
IUUC-Mmr-061662	Microcebus murinus	41.33	3.00e-12	63.90
IUUC-Mdo-062437	Monodelphis domestica	49.07	1.00e-25	108.00
IUUC-Mmu-064159	Mus musculus	54.02	8.00e-24	102.00
IUUC-Mpu-066033	Mustela putorius furo	52.11	8.00e-21	95.50
IUUC-Mlu-067689	Myotis lucifugus	52.75	8.00e-25	105.00
IUUC-Nle-069705	Nomascus leucogenys	54.02	8.00e-24	102.00
IUUC-Oan-073480	Ornithorhynchus anatinus	51.39	1.00e-20	92.00
IUUC-Ocu-074208	Oryctolagus cuniculus	52.87	2.00e-23	100.00
IUUC-Oba-075461	Oryza barthii	84.42	9.00e-93	332.00
IUUC-Obr-076749	Oryza brachyantha	81.47	1.00e-78	285.00
IUUC-Ogl-077129	Oryza glaberrima	84.12	3.00e-93	333.00
IUUC-Ogu-078727	Oryza glumaepatula	84.55	5.00e-94	336.00
IUUC-Oin-079194	Oryza indica	84.12	2.00e-93	333.00
IUUC-Olo-080653	Oryza longistaminata	84.55	5.00e-94	336.00
IUUC-Ome-081636	Oryza meridionalis	84.55	3.00e-94	336.00
IUUC-Oni-082546	Oryza nivara	84.42	7.00e-93	332.00
IUUC-Opu-083228	Oryza punctata	85.78	6.00e-87	312.00
IUUC-Oru-084914	Oryza rufipogon	84.42	9.00e-93	332.00
IUUC-Osa-086216	Oryza sativa	84.12	3.00e-93	333.00
IUUC-Oga-088912	Otolemur garnettii	54.02	8.00e-24	102.00
IUUC-Ptr-090919	Pan troglodytes	54.02	1.00e-23	101.00
IUUC-Pan-092843	Papio anubis	54.02	7.00e-24	102.00
IUUC-Psi-093323	Pelodiscus sinensis	51.39	1.00e-20	92.00
IUUC-Pab-098244	Pongo abelii	54.02	8.00e-24	102.00
IUUC-Pca-100319	Procavia capensis	54.02	4.00e-24	103.00
IUUC-Pva-102249	Pteropus vampyrus	55.17	3.00e-24	103.00
IUUC-Rno-106042	Rattus norvegicus	54.02	8.00e-24	102.00
IUUC-Sha-107361	Sarcophilus harrisii	51.39	8.00e-21	92.40
IUUC-Sit-110690	Setaria italica	89.18	2.00e-87	314.00
IUUC-Sar-113669	Sorex araneus	52.17	4.00e-10	55.10
IUUC-Ssc-115934	Sus scrofa	54.02	8.00e-24	102.00
IUUC-Tgu-116886	Taeniopygia guttata	52.11	1.00e-20	91.70
IUUC-Tsy-119615	Tarsius syrichta	49.53	2.00e-26	110.00
IUUC-Tni-120909	Tetraodon nigroviridis	47.62	2.00e-21	94.40
IUUC-Tur-126198	Triticum urartu	81.40	4.00e-76	276.00
IUUC-Tbe-127360	Tupaia belangeri	52.86	1.00e-20	91.30
IUUC-Ttr-129044	Tursiops truncatus	51.39	1.00e-20	92.00
IUUC-Vpa-130365	Vicugna pacos	50.00	9.00e-20	89.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence