iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-132193

UUCD1 version

UUC-XeT-00006

Ensembl Protein ID

ENSXETP00000031591.3

UniProt Accession

A4IHJ1; A4IHJ1_XENTR

Genbank Protein ID

AAI35553.1; OCA16744.1

Protein Name

Angio-associated migratory cell protein; LOC100124854 protein

Genbank Nucleotide ID

AAMC01126565; KV460569

Gene Name

aamp; LOC100124854; XENTR_v90027945mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000014437.3	ENSXETT00000031591.3	ENSXETP00000031591.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-32	110.5	365	401
UBD/Beta-Prp	5.60e-49	167.1	189	312

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvl 35
           +H++++  l +  +++ + ++s Dg +++WD r+g+ 
   Q: 365  QHESGIVQLLWeqNSPVVYTCSLDGAVRLWDSRSGKM 401
           59**********544****************999975 PP

UBD/Beta-Prp

   S: 100  lsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl..tgghtdsvysl 186
           l+++p  ++l++G++d    +w++++g+c   t++g +   +c ++ pdg+  v G  D+ vr+Wdlk+g+ l+ l  t gh ++ +++
   Q: 189  LEWHPCAHVLLAGTADGNTWMWKIPSGECK--TFQGPSCPATCGQFLPDGRKAVVGYEDGSVRIWDLKQGNALHVLkgTDGHAGPLTCV 275
           7899999**********************9..7*******************************************99777******** PP
   S: 187  sfdsngkelvsgsldgtvklwdlqtgecvrtlnghtd 223
           + + +g  +++gs d + kl++  tg++v  ++  ++
   Q: 276  ASNNDGSLVLTGSVDCDTKLVNTATGKVVGVFKTESN 312
           ***************************9988876554 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MEGAGAGEAG GSGSPSPEAE EAQAQAAQFH EDEEIIEVLE LNDVEPDPDD LASDMEDVDF 60
ADDPEDGEMA DNEEWETEDE GVEEGTDPHD DSELTFSKHT ASVFCVSLDP KESALAVTGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGATCACA GCATCGCCCT GTGTCCCAAT CCTCAGAAGA CGATGGAAGG AGCCGGAGCC 60
GGGGAGGCTG GAGGTTCTGG GTCTCCCAGC CCTGAGGCCG AAGAAGCCCA GGCGCAAGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030687--C:preribosome, large subunit precursor
GO:0051082--F:unfolded protein binding
GO:0042273--P:ribosomal large subunit biogenesis

KEGG

xtr:100124854

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000794	Aegilops tauschii	33.73	1.00e-56	214.00
IUUC-Aml-001781	Ailuropoda melanoleuca	70.19	2.00e-164	571.00
IUUC-Atr-003169	Amborella trichopoda	36.39	1.00e-64	239.00
IUUC-Apl-003939	Anas platyrhynchos	65.49	8.00e-115	406.00
IUUC-Aca-004594	Anolis carolinensis	76.16	1.00e-175	608.00
IUUC-Aly-006277	Arabidopsis lyrata	29.68	1.00e-48	186.00
IUUC-Ath-007701	Arabidopsis thaliana	31.59	3.00e-56	212.00
IUUC-Ago-007790	Ashbya gossypii	26.33	6.00e-23	101.00
IUUC-Acl-008079	Aspergillus clavatus	25.20	4.00e-12	65.90
IUUC-Ame-011651	Astyanax mexicanus	60.77	1.00e-138	486.00
IUUC-Bgr-012118	Blumeria graminis	25.00	4.00e-18	85.90
IUUC-Bta-012833	Bos taurus	71.81	2.00e-165	575.00
IUUC-Bci-013724	Botrytis cinerea	25.84	9.00e-11	61.60
IUUC-Bdi-014289	Brachypodium distachyon	36.16	2.00e-64	239.00
IUUC-Bol-015313	Brassica oleracea	31.59	1.00e-52	200.00
IUUC-Bra-017670	Brassica rapa	29.02	3.00e-43	169.00
IUUC-Cel-018305	Caenorhabditis elegans	29.53	1.00e-38	153.00
IUUC-Cja-019433	Callithrix jacchus	69.88	4.00e-164	570.00
IUUC-Cfa-020093	Canis familiaris	71.57	4.00e-167	580.00
IUUC-Cpo-021742	Cavia porcellus	72.29	8.00e-167	579.00
IUUC-Cre-022781	Chlamydomonas reinhardtii	33.61	7.00e-46	177.00
IUUC-Csa-023498	Chlorocebus sabaeus	69.40	1.00e-163	568.00
IUUC-Cho-024628	Choloepus hoffmanni	70.80	6.00e-127	446.00
IUUC-Cin-025244	Ciona intestinalis	45.21	2.00e-87	315.00
IUUC-Csv-026218	Ciona savignyi	46.65	3.00e-91	328.00
IUUC-Cne-026911	Cryptococcus neoformans	27.57	7.00e-29	121.00
IUUC-Dre-028528	Danio rerio	59.52	1.00e-141	496.00
IUUC-Dno-029297	Dasypus novemcinctus	70.50	1.00e-163	568.00
IUUC-Dor-030543	Dipodomys ordii	74.47	8.00e-53	200.00
IUUC-Dme-031587	Drosophila melanogaster	31.75	2.00e-49	189.00
IUUC-Ete-033100	Echinops telfairi	62.34	3.00e-103	367.00
IUUC-Eca-034277	Equus caballus	71.81	9.00e-170	589.00
IUUC-Eeu-035052	Erinaceus europaeus	73.91	2.00e-85	309.00
IUUC-Fca-036115	Felis catus	71.57	1.00e-166	578.00
IUUC-Fal-036864	Ficedula albicollis	80.99	2.00e-179	621.00
IUUC-Gmo-039090	Gadus morhua	63.14	9.00e-102	363.00
IUUC-Gga-040545	Gallus gallus	77.83	0.00e+00	657.00
IUUC-Gac-042027	Gasterosteus aculeatus	71.43	4.00e-152	530.00
IUUC-Gma-044168	Glycine max	37.64	1.00e-61	230.00
IUUC-Ggo-045036	Gorilla gorilla	69.64	8.00e-164	569.00
IUUC-Hsa-046749	Homo sapiens	69.64	8.00e-164	569.00
IUUC-Hvu-047217	Hordeum vulgare	34.67	9.00e-61	227.00
IUUC-Itr-048114	Ictidomys tridecemlineatus	72.05	4.00e-167	580.00
IUUC-Kpa-049147	Komagataella pastoris	24.80	6.00e-27	114.00
IUUC-Lch-049747	Latimeria chalumnae	66.67	1.00e-157	549.00
IUUC-Lpe-051433	Leersia perrieri	32.58	2.00e-55	209.00
IUUC-Loc-052406	Lepisosteus oculatus	72.29	7.00e-174	603.00
IUUC-Lma-053153	Leptosphaeria maculans	23.59	4.00e-19	89.40
IUUC-Laf-053901	Loxodonta africana	72.05	4.00e-166	577.00
IUUC-Mcc-054990	Macaca mulatta	74.73	2.00e-162	565.00
IUUC-Meu-056844	Macropus eugenii	73.80	4.00e-167	580.00
IUUC-Mtr-057759	Medicago truncatula	36.89	3.00e-61	229.00
IUUC-Mla-058856	Melampsora laricipopulina	31.11	7.00e-41	161.00
IUUC-Mga-059749	Meleagris gallopavo	81.15	0.00e+00	628.00
IUUC-Mvi-060237	Microbotryum violaceum	33.24	2.00e-50	192.00
IUUC-Mmr-061270	Microcebus murinus	68.52	4.00e-162	564.00
IUUC-Mdo-062965	Monodelphis domestica	72.84	2.00e-169	588.00
IUUC-Mmu-064081	Mus musculus	70.43	2.00e-164	572.00
IUUC-Mac-065236	Musa acuminata	35.78	6.00e-61	227.00
IUUC-Mpu-066355	Mustela putorius furo	72.05	1.00e-167	582.00
IUUC-Mlu-067630	Myotis lucifugus	72.36	4.00e-166	577.00
IUUC-Ncr-068720	Neurospora crassa	23.98	4.00e-13	69.30
IUUC-Nle-069701	Nomascus leucogenys	71.57	1.00e-164	572.00
IUUC-Opr-070337	Ochotona princeps	67.23	6.00e-151	526.00
IUUC-Ont-072614	Oreochromis niloticus	72.57	2.00e-157	548.00
IUUC-Ocu-073912	Oryctolagus cuniculus	70.43	1.00e-162	565.00
IUUC-Oba-075195	Oryza barthii	33.33	2.00e-56	213.00
IUUC-Obr-076059	Oryza brachyantha	33.33	1.00e-58	220.00
IUUC-Ogl-077318	Oryza glaberrima	33.33	4.00e-59	221.00
IUUC-Ogu-078579	Oryza glumaepatula	33.53	4.00e-57	215.00
IUUC-Oin-079340	Oryza indica	33.33	4.00e-59	221.00
IUUC-Olo-080813	Oryza longistaminata	33.53	7.00e-57	214.00
IUUC-Ome-081420	Oryza meridionalis	33.63	3.00e-56	212.00
IUUC-Oni-082650	Oryza nivara	33.33	2.00e-56	213.00
IUUC-Opu-083832	Oryza punctata	33.63	4.00e-58	218.00
IUUC-Oru-084207	Oryza rufipogon	33.33	2.00e-56	213.00
IUUC-Osa-085708	Oryza sativa	33.33	4.00e-59	221.00
IUUC-Ola-087164	Oryzias latipes	68.86	3.00e-151	527.00
IUUC-Olu-087824	Ostreococcus lucimarinus	35.88	3.00e-52	198.00
IUUC-Oga-088864	Otolemur garnettii	70.43	2.00e-163	568.00
IUUC-Oar-090115	Ovis aries	70.12	2.00e-165	575.00
IUUC-Ptr-091398	Pan troglodytes	71.57	1.00e-164	572.00
IUUC-Pan-092002	Papio anubis	69.64	7.00e-164	569.00
IUUC-Psi-093979	Pelodiscus sinensis	70.04	5.00e-87	313.00
IUUC-Pma-094618	Petromyzon marinus	56.77	7.00e-134	470.00
IUUC-Pno-095088	Phaeosphaeria nodorum	23.74	4.00e-14	73.90
IUUC-Ppa-095351	Physcomitrella patens	38.29	7.00e-73	267.00
IUUC-Pfo-097078	Poecilia formosa	71.94	1.00e-161	562.00
IUUC-Pab-098540	Pongo abelii	71.57	1.00e-164	572.00
IUUC-Pop-099140	Populus trichocarpa	35.92	5.00e-62	231.00
IUUC-Pca-101072	Procavia capensis	75.73	8.00e-156	543.00
IUUC-Ppe-101979	Prunus persica	35.17	3.00e-61	228.00
IUUC-Pva-102400	Pteropus vampyrus	65.30	3.00e-145	508.00
IUUC-Pgr-103362	Puccinia graminis	31.54	2.00e-47	182.00
IUUC-Ptt-103756	Puccinia triticina	34.30	3.00e-36	145.00
IUUC-Pte-104401	Pyrenophora teres	23.32	5.00e-13	68.90
IUUC-Rno-105672	Rattus norvegicus	72.77	3.00e-166	577.00
IUUC-Sja-107693	Schizosaccharomyces japonicus	32.78	1.00e-50	193.00
IUUC-Spo-108208	Schizosaccharomyces pombe	33.51	9.00e-55	207.00
IUUC-Smo-109168	Selaginella moellendorffii	36.34	2.00e-61	229.00
IUUC-Sit-109978	Setaria italica	34.77	2.00e-60	226.00
IUUC-Sly-111316	Solanum lycopersicum	36.29	3.00e-63	235.00
IUUC-Stu-111956	Solanum tuberosum	36.57	2.00e-64	239.00
IUUC-Sbi-114189	Sorghum bicolor	34.48	1.00e-58	220.00
IUUC-Sre-115029	Sporisorium reilianum	33.24	7.00e-45	174.00
IUUC-Ssc-116045	Sus scrofa	61.29	4.00e-127	447.00
IUUC-Tgu-117514	Taeniopygia guttata	80.44	3.00e-178	617.00
IUUC-Tru-117851	Takifugu rubripes	67.46	1.00e-152	532.00
IUUC-Tsy-119140	Tarsius syrichta	67.47	2.00e-150	525.00
IUUC-Tni-120248	Tetraodon nigroviridis	68.66	1.00e-153	535.00
IUUC-Tca-121686	Theobroma cacao	32.77	6.00e-58	217.00
IUUC-Tae-124235	Triticum aestivum	35.21	3.00e-55	208.00
IUUC-Tur-126174	Triticum urartu	34.32	2.00e-57	216.00
IUUC-Tme-127079	Tuber melanosporum	28.22	3.00e-16	79.70
IUUC-Tbe-127476	Tupaia belangeri	72.95	1.00e-85	310.00
IUUC-Ttr-128182	Tursiops truncatus	71.57	2.00e-165	575.00
IUUC-Uma-129624	Ustilago maydis	33.72	4.00e-49	188.00
IUUC-Vpa-130605	Vicugna pacos	64.17	3.00e-125	441.00
IUUC-Vvi-131319	Vitis vinifera	36.34	5.00e-63	234.00
IUUC-Xma-133880	Xiphophorus maculatus	71.46	1.00e-161	562.00
IUUC-Yli-134520	Yarrowia lipolytica	28.41	3.00e-29	122.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence