iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076318

Ensembl Protein ID

OB03G39620.1

UniProt Accession

J3LSD6; J3LSD6_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB03G39620	OB03G39620.1	OB03G39620.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-41	139.7	6	44
UBD/Beta-Prp	5.90e-59	200.4	2	214

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHt+  +c+af +  ++l+sGs D t++vW++r+g++l+
   Q: 6    GHTNYAFCVAFsPHgNMLASGSFDETVRVWEVRSGRCLR 44
           8***********777**********************97 PP

UBD/Beta-Prp

   S: 88   htlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvy 184
            tl+gh++++ +++fsp g+ l+sGs d+t+rvw++++g cl+ +l  h++ v+ v ++ dg ++vsGs+D+ +r+Wd++tg +++tl  +  ++v 
   Q: 2    KTLTGHTNYAFCVAFSPHGNMLASGSFDETVRVWEVRSGRCLR-VLPAHSEPVTAVDFNRDGAMIVSGSYDGLCRIWDSATGHCIKTLIDDESPPVS 97
           699****************************************.********************************************9999***** PP
   S: 185  slsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs...pnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdn 278
             +f++ngk+++++ ld++++lw++++g+ ++t++gh ++ +++ +     n++++vsgs+D+ ++iWdl+++++l++l++h ++vi+v++ ++++n
   Q: 98   FAKFSPNGKFVLAATLDSKLRLWNFSAGKFLKTYTGHVNTKYCIPAAfsiTNGKYIVSGSEDKCVYIWDLQTRKILQKLEGHTDTVIAVSC-HPNEN 193
           *******************************************97766799****************************************.***** PP
   S: 279  vlvlgse..dskvniwklkkn 297
           ++++g+   d++v++w++k++
   Q: 194  MIASGGLdsDKTVKVWAQKEE 214
           *****98899*******9876 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MKTLTGHTNY AFCVAFSPHG NMLASGSFDE TVRVWEVRSG RCLRVLPAHS EPVTAVDFNR 60
DGAMIVSGSY DGLCRIWDSA TGHCIKTLID DESPPVSFAK FSPNGKFVLA ATLDSKLRLW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGACGC TGACCGGACA CACCAACTAC GCCTTCTGCG TCGCCTTCAG CCCCCACGGG 60
AACATGCTCG CCTCGGGCTC CTTTGACGAG ACGGTGCGCG TGTGGGAGGT CAGGTCGGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0048188--C:Set1C/COMPASS complex
GO:0010228--P:vegetative to reproductive phase transition of meristem

KEGG

obr:102722754

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000333	Aegilops tauschii	73.12	5.00e-105	372.00
IUUC-Aly-005723	Arabidopsis lyrata	72.90	1.00e-100	358.00
IUUC-Ath-007308	Arabidopsis thaliana	72.90	4.00e-100	356.00
IUUC-Ago-007915	Ashbya gossypii	38.54	1.00e-34	139.00
IUUC-Afl-008596	Aspergillus flavus	48.66	6.00e-58	217.00
IUUC-Aor-010222	Aspergillus oryzae	48.66	7.00e-58	217.00
IUUC-Bdi-014263	Brachypodium distachyon	89.86	3.00e-120	423.00
IUUC-Bol-015900	Brassica oleracea	69.81	1.00e-96	345.00
IUUC-Bra-017143	Brassica rapa	69.95	9.00e-98	348.00
IUUC-Cme-027119	Cyanidioschyzon merolae	57.01	1.00e-74	272.00
IUUC-Eeu-034805	Erinaceus europaeus	63.64	5.00e-86	310.00
IUUC-Fox-037876	Fusarium oxysporum	48.57	3.00e-59	220.00
IUUC-Ggr-040071	Gaeumannomyces graminis	53.06	8.00e-45	174.00
IUUC-Gma-043987	Glycine max	74.30	1.00e-103	368.00
IUUC-Hvu-047077	Hordeum vulgare	90.60	1.00e-62	231.00
IUUC-Kpa-049404	Komagataella pastoris	44.67	3.00e-45	174.00
IUUC-Lpe-051082	Leersia perrieri	97.72	3.00e-130	456.00
IUUC-Meu-056440	Macropus eugenii	64.59	6.00e-87	313.00
IUUC-Mor-056965	Magnaporthe oryzae	41.71	5.00e-48	184.00
IUUC-Mpo-057333	Magnaporthe poae	52.74	2.00e-44	172.00
IUUC-Mtr-057951	Medicago truncatula	74.30	4.00e-103	366.00
IUUC-Mla-058896	Melampsora laricipopulina	43.38	3.00e-54	204.00
IUUC-Mmr-061436	Microcebus murinus	64.59	2.00e-87	314.00
IUUC-Mac-065310	Musa acuminata	81.19	5.00e-111	393.00
IUUC-Ncr-068651	Neurospora crassa	43.11	2.00e-48	186.00
IUUC-Oba-075082	Oryza barthii	84.13	2.00e-124	437.00
IUUC-Ogl-077251	Oryza glaberrima	96.80	2.00e-129	454.00
IUUC-Ogu-078882	Oryza glumaepatula	72.73	5.00e-112	396.00
IUUC-Oin-079601	Oryza indica	84.13	1.00e-124	438.00
IUUC-Olo-080976	Oryza longistaminata	96.80	1.00e-128	451.00
IUUC-Ome-081430	Oryza meridionalis	96.80	2.00e-129	454.00
IUUC-Oni-082182	Oryza nivara	72.73	5.00e-112	396.00
IUUC-Opu-083880	Oryza punctata	96.35	3.00e-128	450.00
IUUC-Oru-084997	Oryza rufipogon	58.17	1.00e-91	328.00
IUUC-Osa-085706	Oryza sativa	96.80	2.00e-129	454.00
IUUC-Pop-099778	Populus trichocarpa	75.94	2.00e-103	367.00
IUUC-Ppe-101341	Prunus persica	71.36	1.00e-98	352.00
IUUC-Pgr-103589	Puccinia graminis	41.85	9.00e-56	209.00
IUUC-Sce-106243	Saccharomyces cerevisiae	31.44	1.00e-29	122.00
IUUC-Sit-110688	Setaria italica	92.52	1.00e-121	428.00
IUUC-Sly-110891	Solanum lycopersicum	76.30	8.00e-103	365.00
IUUC-Stu-112365	Solanum tuberosum	76.78	6.00e-103	366.00
IUUC-Sbi-114284	Sorghum bicolor	90.70	2.00e-120	424.00
IUUC-Tae-125819	Triticum aestivum	89.91	2.00e-120	424.00
IUUC-Tur-126217	Triticum urartu	75.42	3.00e-104	370.00
IUUC-Vvi-131269	Vitis vinifera	75.70	3.00e-104	370.00
IUUC-Zma-135765	Zea mays	90.70	4.00e-120	423.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence