iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014272

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000884

Gene Name

LOC100825269; BRADI_5g04540

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI5G04540	BRADI5G04540.1	BRADI5G04540.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.60e-07	30.1	33	75

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+++   + ++ lpC H+fh+dC+ +w       +k+ +CPlCr
   Q: 33   CCVCLSRIraGEATRRLPCRHAFHRDCVDRW----LALCKR-TCPLCR 75
           ********6633399****************....445555.5****8 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MSYLLSYISK MLCIKIPPSE AKQLDVDGAP TECCVCLSRI RAGEATRRLP CRHAFHRDCV 60
DRWLALCKRT CPLCRVYVVD ANSRQAAAAK HSGEPLADDL VIWFSTMLVP GF 112

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCTACC TCCTCTCCTA CATCTCCAAG ATGCTGTGCA TCAAGATACC GCCGTCGGAA 60
GCGAAGCAGC TGGATGTCGA CGGCGCTCCG ACGGAGTGCT GCGTGTGCCT GTCGAGGATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

bdi:100825269

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001107	Aegilops tauschii	79.46	5.00e-45	171.00
IUUC-Atr-003149	Amborella trichopoda	50.52	9.00e-22	94.40
IUUC-Cne-026985	Cryptococcus neoformans	45.07	2.00e-12	67.40
IUUC-Gma-043573	Glycine max	45.57	9.00e-17	78.20
IUUC-Hvu-047425	Hordeum vulgare	78.57	9.00e-44	167.00
IUUC-Lpe-051646	Leersia perrieri	75.42	5.00e-44	168.00
IUUC-Mac-065194	Musa acuminata	48.39	2.00e-20	89.00
IUUC-Oba-075537	Oryza barthii	75.86	3.00e-45	172.00
IUUC-Obr-076744	Oryza brachyantha	79.31	4.00e-46	175.00
IUUC-Ogl-077202	Oryza glaberrima	75.86	3.00e-45	172.00
IUUC-Ogu-078719	Oryza glumaepatula	75.86	3.00e-45	172.00
IUUC-Oin-079328	Oryza indica	75.86	3.00e-45	172.00
IUUC-Olo-080984	Oryza longistaminata	74.14	2.00e-44	169.00
IUUC-Ome-081534	Oryza meridionalis	75.86	4.00e-45	172.00
IUUC-Oni-082733	Oryza nivara	75.86	3.00e-45	172.00
IUUC-Opu-083956	Oryza punctata	78.45	1.00e-45	173.00
IUUC-Oru-084287	Oryza rufipogon	75.86	3.00e-45	172.00
IUUC-Osa-085711	Oryza sativa	75.86	3.00e-45	172.00
IUUC-Ppe-101424	Prunus persica	34.71	3.00e-17	79.70
IUUC-Sit-110455	Setaria italica	80.25	3.00e-32	129.00
IUUC-Stu-112532	Solanum tuberosum	48.81	3.00e-19	85.90
IUUC-Sbi-114574	Sorghum bicolor	67.92	3.00e-33	132.00
IUUC-Tca-121024	Theobroma cacao	43.75	1.00e-16	78.20
IUUC-Tae-124249	Triticum aestivum	79.46	2.00e-43	166.00
IUUC-Vvi-131072	Vitis vinifera	39.78	3.00e-17	79.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence