iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__2088__AT3G18777.1	fgenesh2_kg.3__2088__AT3G18777.1	fgenesh2_kg.3__2088__AT3G18777.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.60e-08	34.9	138	180

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++f   ++ +++lp C H fh  C+ kw       s + +CP+Cr
   Q: 138  CAICLSEFvsgER-VKLLPkCHHGFHVRCIDKW------LSSHSSCPTCR 180
           ********99777.*******************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSPATSAPIT KPTELFQDIR GDFYSRRLLL HTAYQPPTTA SSPFADAHET SHTYASHMSF 60
DANVVMVLSV LLCALVCSLG LHSIIRCALR YSNLLSSEAS DELSVRLANT GVKQKALKSF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCCCATTA AATGTAAGAA AGTATATGCA AACCTTTACC TTTCCTCTAT ATATAGAACC 60
TGCAACAAAA ACCTAGAAGA TCTATCTATC AAACTCTTCA AACTAGGTTA TCATGTCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_479387

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002440	Amborella trichopoda	47.62	2.00e-31	127.00
IUUC-Ath-006920	Arabidopsis thaliana	70.37	3.00e-69	253.00
IUUC-Bdi-014146	Brachypodium distachyon	47.74	9.00e-41	159.00
IUUC-Bol-015875	Brassica oleracea	79.46	2.00e-93	334.00
IUUC-Bra-017456	Brassica rapa	78.12	1.00e-99	354.00
IUUC-Gma-043693	Glycine max	53.28	2.00e-62	231.00
IUUC-Hvu-047571	Hordeum vulgare	50.00	1.00e-36	144.00
IUUC-Lpe-051348	Leersia perrieri	46.43	9.00e-37	145.00
IUUC-Mtr-058186	Medicago truncatula	59.49	5.00e-59	219.00
IUUC-Mac-065335	Musa acuminata	46.63	1.00e-39	155.00
IUUC-Oba-075992	Oryza barthii	47.73	7.00e-33	133.00
IUUC-Obr-076307	Oryza brachyantha	48.02	1.00e-33	135.00
IUUC-Ogl-077735	Oryza glaberrima	47.98	1.00e-32	131.00
IUUC-Ogu-078127	Oryza glumaepatula	46.89	1.00e-31	129.00
IUUC-Olo-080939	Oryza longistaminata	47.46	6.00e-33	132.00
IUUC-Ome-081946	Oryza meridionalis	47.22	2.00e-33	135.00
IUUC-Oni-083084	Oryza nivara	47.46	2.00e-32	132.00
IUUC-Opu-084141	Oryza punctata	47.06	5.00e-30	124.00
IUUC-Oru-084596	Oryza rufipogon	47.46	1.00e-32	132.00
IUUC-Osa-085865	Oryza sativa	47.22	2.00e-33	134.00
IUUC-Pop-099910	Populus trichocarpa	65.12	4.00e-74	270.00
IUUC-Ppe-101930	Prunus persica	64.56	3.00e-68	250.00
IUUC-Pgr-103614	Puccinia graminis	45.45	9.00e-09	52.80
IUUC-Sit-110398	Setaria italica	47.69	1.00e-34	138.00
IUUC-Sly-111257	Solanum lycopersicum	57.22	9.00e-42	162.00
IUUC-Stu-112198	Solanum tuberosum	53.39	4.00e-55	207.00
IUUC-Sbi-114701	Sorghum bicolor	48.24	2.00e-31	128.00
IUUC-Tca-120946	Theobroma cacao	62.21	4.00e-72	263.00
IUUC-Tae-123289	Triticum aestivum	47.24	6.00e-30	123.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence