iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131135

UUCD1 version

UUC-ViV-01132

Ensembl Protein ID

VIT_19s0093g00560.t01

UniProt Accession

D7TR00; D7TR00_VITVI

Genbank Protein ID

CBI32923.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596009

Gene Name

UBP25; VIT_19s0093g00560

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_19s0093g00560	VIT_19s0093g00560.t01	VIT_19s0093g00560.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.90e-79	267.9	23	332

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgye 88
           GlkNlgN+CY+NSvLQcL+ +p+l++++l+  +++ ++   + +++ +++   ++++++l + + ++ +p+++ ++l+ +ae+f+  +
   Q: 23   GLKNLGNSCYLNSVLQCLTYTPPLANFCLNhLHSSLCDSAVDRKRECPFCILEKRIVRSL-SMDLTQDAPSKIQSCLRIFAEHFRLGR 109
           9*****************************666666777777888889999999999999.9999999******************** PP
   S: 89   qqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpv 176
           q+Da+Efl++++d+ ++++ +              ++l ++ ++++  +++s+++d+F+g l+sq+kcl+c+ +s+++++ +d+sl+v
   Q: 110  QEDAHEFLRYVIDACHNTCLR---L----------KKLRRKGNNDNGPSTTSVVKDIFGGALQSQVKCLSCGAESNKTDEIMDISLDV 184
           *******************22...2..........23334445678999*************************************** PP
   S: 177  pgkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspf 264
              +     sl+++L++f+++e l+g+nky+c++ckk++ a+k++++ + P+vL+++LkRf    e+    ki+k + f + L ls++
   Q: 185  LHFN-----SLKQALQNFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQAPNVLVIQLKRF----EGLYGGKIDKLIAFEEVLVLSSY 263
           *999.....9***************************************************....678889*********99****** PP
   S: 265  ctspeekqkekkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           +++ ++++  + +Y+L+a +vHsG s++sGHY+ay+k+  g+W++++Ds+V+ ++ + vl+   ++ Y+lf+ r
   Q: 264  MNKASQDS--HPEYNLFATIVHSGySPESGHYYAYIKDAMGRWYCCNDSYVSLSTLQGVLS---EKVYILFFSR 332
           ***77776..9**************************************************...*******987 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MALQMTWQPS LLHQKRKNGP PLGLKNLGNS CYLNSVLQCL TYTPPLANFC LNHLHSSLCD 60
SAVDRKRECP FCILEKRIVR SLSMDLTQDA PSKIQSCLRI FAEHFRLGRQ EDAHEFLRYV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAATCAAGAG AGATAAGAAG TCCCAAGTCC TCCGGAAGAG CCTCAATCAA CCGGACGGCC 60
CAGCACTCAA AGGAAACAAA ACAAAAGGGG GAAAAGAAAA GAGAAAAAAC AGAAGGGGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

vvi:100253154

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001017	Aegilops tauschii	41.65	7.00e-107	380.00
IUUC-Atr-002832	Amborella trichopoda	51.91	4.00e-142	497.00
IUUC-Aly-005983	Arabidopsis lyrata	52.62	0.00e+00	636.00
IUUC-Ath-006707	Arabidopsis thaliana	52.53	0.00e+00	630.00
IUUC-Bdi-014044	Brachypodium distachyon	45.33	5.00e-131	460.00
IUUC-Bol-016356	Brassica oleracea	49.27	8.00e-166	576.00
IUUC-Bra-018096	Brassica rapa	49.27	2.00e-161	561.00
IUUC-Gma-043410	Glycine max	62.21	0.00e+00	718.00
IUUC-Hvu-047673	Hordeum vulgare	40.23	3.00e-83	301.00
IUUC-Lpe-050888	Leersia perrieri	43.59	2.00e-126	445.00
IUUC-Mtr-058396	Medicago truncatula	57.59	0.00e+00	693.00
IUUC-Mac-065596	Musa acuminata	52.66	3.00e-150	524.00
IUUC-Oba-075223	Oryza barthii	44.67	2.00e-124	439.00
IUUC-Obr-076589	Oryza brachyantha	42.55	1.00e-113	402.00
IUUC-Ogl-077769	Oryza glaberrima	44.67	2.00e-124	439.00
IUUC-Ogu-078416	Oryza glumaepatula	43.46	2.00e-108	385.00
IUUC-Oin-079451	Oryza indica	44.76	2.00e-125	442.00
IUUC-Olo-080569	Oryza longistaminata	44.60	6.00e-125	440.00
IUUC-Ome-081320	Oryza meridionalis	42.19	2.00e-109	389.00
IUUC-Oni-082823	Oryza nivara	42.95	2.00e-108	385.00
IUUC-Opu-083432	Oryza punctata	39.68	5.00e-104	370.00
IUUC-Oru-084652	Oryza rufipogon	39.70	9.00e-94	336.00
IUUC-Osa-085846	Oryza sativa	44.23	5.00e-125	440.00
IUUC-Ppa-095241	Physcomitrella patens	56.50	6.00e-118	417.00
IUUC-Pop-098875	Populus trichocarpa	63.27	0.00e+00	759.00
IUUC-Ppe-101980	Prunus persica	58.83	0.00e+00	645.00
IUUC-Ssl-108506	Sclerotinia sclerotiorum	29.23	5.00e-25	108.00
IUUC-Smo-108788	Selaginella moellendorffii	60.97	8.00e-112	395.00
IUUC-Sit-109696	Setaria italica	44.43	2.00e-124	438.00
IUUC-Sly-111085	Solanum lycopersicum	55.59	1.00e-173	602.00
IUUC-Stu-111972	Solanum tuberosum	55.65	8.00e-166	576.00
IUUC-Sbi-114319	Sorghum bicolor	41.46	5.00e-116	410.00
IUUC-Tca-121693	Theobroma cacao	62.84	3.00e-178	617.00
IUUC-Tae-125372	Triticum aestivum	43.50	3.00e-130	457.00
IUUC-Tur-126469	Triticum urartu	41.61	9.00e-113	399.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence