iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017357

Ensembl Protein ID

Bra009136.1-P

UniProt Accession

M4CY39; M4CY39_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra009136	Bra009136.1	Bra009136.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.30e-07	31.1	147	189

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl +f   + +++lp C+H+fh +C+  w         + +CPlCr
   Q: 147  CAVCLARFepTEVLRLLPkCKHAFHVECVDTW------LDAHSTCPLCR 189
           ********5544477777**************......**********8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSSSSSLLLV SLLSLFLNSS LADNDRYNTT AVVIMNPTTP PPLPPPSPLQ RHNVNSSFMP 60
RIAVVIAVLT VVFSLTCLLL LSVKHCKRRN GSVNDTQRFA TSRYYGGGGS GGGGVGRKNS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTTCTT CTTCCTCGTT ACTTCTTGTT TCTCTCCTCT CCCTCTTCCT CAACTCCTCA 60
CTCGCAGACA ATGATCGTTA CAACACCACG GCGGTCGTGA TAATGAACCC AACAACACCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003122	Amborella trichopoda	57.82	3.00e-46	179.00
IUUC-Aly-006151	Arabidopsis lyrata	78.71	2.00e-134	471.00
IUUC-Ath-007131	Arabidopsis thaliana	79.64	1.00e-134	472.00
IUUC-Bdi-014982	Brachypodium distachyon	68.66	2.00e-44	172.00
IUUC-Bol-015760	Brassica oleracea	94.10	3.00e-165	574.00
IUUC-Gma-042757	Glycine max	50.99	2.00e-56	212.00
IUUC-Hvu-047245	Hordeum vulgare	40.63	2.00e-51	196.00
IUUC-Lpe-051226	Leersia perrieri	61.19	3.00e-44	172.00
IUUC-Mtr-057973	Medicago truncatula	46.70	7.00e-60	224.00
IUUC-Mac-065494	Musa acuminata	45.79	7.00e-53	200.00
IUUC-Oba-075267	Oryza barthii	66.42	4.00e-45	175.00
IUUC-Ogl-077528	Oryza glaberrima	66.42	5.00e-45	174.00
IUUC-Ogu-078754	Oryza glumaepatula	65.44	3.00e-45	175.00
IUUC-Oin-079781	Oryza indica	65.44	3.00e-45	175.00
IUUC-Ome-081863	Oryza meridionalis	65.44	3.00e-45	175.00
IUUC-Oni-082943	Oryza nivara	65.44	3.00e-45	175.00
IUUC-Opu-083466	Oryza punctata	64.71	3.00e-45	175.00
IUUC-Oru-084675	Oryza rufipogon	65.44	3.00e-45	175.00
IUUC-Osa-085804	Oryza sativa	64.71	7.00e-45	174.00
IUUC-Ppa-095281	Physcomitrella patens	50.34	5.00e-32	132.00
IUUC-Pop-099148	Populus trichocarpa	48.27	1.00e-75	276.00
IUUC-Ppe-102095	Prunus persica	51.82	2.00e-65	242.00
IUUC-Smo-109603	Selaginella moellendorffii	75.47	1.00e-22	96.70
IUUC-Sit-109970	Setaria italica	45.51	3.00e-58	218.00
IUUC-Sly-111677	Solanum lycopersicum	63.89	4.00e-49	188.00
IUUC-Stu-112327	Solanum tuberosum	64.24	1.00e-51	196.00
IUUC-Sbi-114529	Sorghum bicolor	41.14	9.00e-56	210.00
IUUC-Tae-124580	Triticum aestivum	62.69	3.00e-43	169.00
IUUC-Vvi-131553	Vitis vinifera	51.25	6.00e-83	301.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence