iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099837

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000354

Gene Name

POPTRDRAFT_578510; POPTR_0018s09200g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0018s09200	POPTR_0018s09200.1	POPTR_0018s09200.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.20e-08	34.7	117	159

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+ f+d   +++lp C+H+fh +C+ +w        k+ +CPlCr
   Q: 117  CAVCLSKFEDIeiLRLLPkCKHAFHINCVDQW------LEKHSSCPLCR 159
           ********7723355666**************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MNQSSFITLQ LLFVLFRVQA QNTFIQGNEP SQDAVSNFRP SLAVVIGILF LIFSLTFILL 60
IYAKFCHRGG LVHGGSENGP ALTRSASRFS GIDKTVIESL PFFRFTSLKG SREGLECAVC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATCAAT CAAGTTTTAT CACTTTGCAA CTCCTATTTG TGCTCTTCCG AGTCCAAGCA 60
CAGAATACTT TCATCCAGGG AAATGAACCT TCACAGGATG CTGTCTCGAA TTTCCGACCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0018s09200g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002959	Amborella trichopoda	57.07	7.00e-63	234.00
IUUC-Aly-005935	Arabidopsis lyrata	46.97	1.00e-98	352.00
IUUC-Ath-007561	Arabidopsis thaliana	45.83	2.00e-95	341.00
IUUC-Bol-015814	Brassica oleracea	48.52	1.00e-93	336.00
IUUC-Bra-017519	Brassica rapa	47.07	2.00e-90	325.00
IUUC-Gma-042792	Glycine max	58.47	4.00e-130	457.00
IUUC-Hvu-047489	Hordeum vulgare	35.32	4.00e-50	191.00
IUUC-Lpe-051018	Leersia perrieri	35.26	6.00e-45	174.00
IUUC-Mtr-057998	Medicago truncatula	48.01	6.00e-91	327.00
IUUC-Mac-064747	Musa acuminata	39.47	2.00e-67	249.00
IUUC-Oba-075667	Oryza barthii	43.90	9.00e-44	170.00
IUUC-Ogl-077500	Oryza glaberrima	43.90	9.00e-44	170.00
IUUC-Ogu-078252	Oryza glumaepatula	43.80	4.00e-45	174.00
IUUC-Ome-081414	Oryza meridionalis	43.21	9.00e-42	163.00
IUUC-Oni-082687	Oryza nivara	43.90	9.00e-44	170.00
IUUC-Opu-084088	Oryza punctata	36.73	7.00e-57	213.00
IUUC-Oru-084787	Oryza rufipogon	43.78	2.00e-44	172.00
IUUC-Osa-085704	Oryza sativa	43.90	9.00e-44	170.00
IUUC-Ppe-101585	Prunus persica	59.05	3.00e-119	421.00
IUUC-Sit-110634	Setaria italica	35.25	1.00e-58	219.00
IUUC-Sly-111674	Solanum lycopersicum	46.60	3.00e-92	330.00
IUUC-Stu-111967	Solanum tuberosum	50.48	5.00e-100	357.00
IUUC-Sbi-114371	Sorghum bicolor	35.58	2.00e-45	176.00
IUUC-Tca-121197	Theobroma cacao	62.70	2.00e-146	511.00
IUUC-Tae-125327	Triticum aestivum	34.32	3.00e-49	188.00
IUUC-Vvi-131412	Vitis vinifera	63.55	5.00e-131	460.00
IUUC-Yli-134336	Yarrowia lipolytica	38.14	5.00e-12	65.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence