iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131354

UUCD1 version

UUC-ViV-00877

Ensembl Protein ID

VIT_09s0002g00220.t01

UniProt Accession

F6HXK6; F6HXK6_VITVI

Genbank Protein ID

CCB59236.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596494

Gene Name

VIT_09s0002g00220

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_09s0002g00220	VIT_09s0002g00220.t01	VIT_09s0002g00220.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-07	32.8	109	151

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+++   ++  ++lp C+H fh +C+ +w       + + +CPlCr
   Q: 109  CAVCLSELvtgEK-ARLLPkCNHGFHVECIDMW------FQSHSTCPLCR 151
           ********88555.899999*************......9999******8 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MGDSFDSSSL DDSAAVELSG KIMVVAIIVL FFVVVFVLFL HLYAKWFWWR TADRGSSFGG 60
SRRRRRRFVF APGQDPALPA MRRGLDPSIL GSIPVLVFRP EEFKDGLECA VCLSELVTGE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCATTTTTC ATTCATAGAG AGGTTGAAAG ATGGGGGACT CCTTTGATTC GAGCTCGTTG 60
GACGACTCCG CAGCCGTGGA ACTGAGCGGC AAGATTATGG TGGTAGCCAT AATAGTTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

vvi:100267019

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000301	Aegilops tauschii	50.00	6.00e-21	92.40
IUUC-Atr-003085	Amborella trichopoda	44.40	5.00e-40	157.00
IUUC-Aly-005421	Arabidopsis lyrata	43.65	4.00e-52	197.00
IUUC-Ath-006957	Arabidopsis thaliana	43.00	2.00e-50	191.00
IUUC-Bdi-014880	Brachypodium distachyon	50.78	1.00e-26	112.00
IUUC-Bol-015888	Brassica oleracea	48.65	4.00e-43	167.00
IUUC-Bra-016720	Brassica rapa	48.65	5.00e-42	163.00
IUUC-Gma-044235	Glycine max	55.81	2.00e-59	221.00
IUUC-Hvu-047333	Hordeum vulgare	44.88	3.00e-28	117.00
IUUC-Lpe-051092	Leersia perrieri	43.80	4.00e-23	100.00
IUUC-Mtr-058409	Medicago truncatula	56.04	6.00e-56	209.00
IUUC-Mac-065123	Musa acuminata	44.04	2.00e-39	155.00
IUUC-Oba-074984	Oryza barthii	52.88	4.00e-26	111.00
IUUC-Obr-076471	Oryza brachyantha	38.30	2.00e-21	94.40
IUUC-Ogl-077250	Oryza glaberrima	52.88	4.00e-26	110.00
IUUC-Ogu-078929	Oryza glumaepatula	52.88	4.00e-26	111.00
IUUC-Oin-079559	Oryza indica	52.88	4.00e-26	111.00
IUUC-Ome-081596	Oryza meridionalis	51.55	8.00e-23	100.00
IUUC-Oni-082758	Oryza nivara	52.88	2.00e-26	111.00
IUUC-Opu-083253	Oryza punctata	42.97	1.00e-18	85.90
IUUC-Oru-084427	Oryza rufipogon	52.88	4.00e-26	111.00
IUUC-Osa-086236	Oryza sativa	52.88	4.00e-26	110.00
IUUC-Pop-099883	Populus trichocarpa	54.24	3.00e-48	184.00
IUUC-Ppe-101738	Prunus persica	56.79	2.00e-54	204.00
IUUC-Sit-109688	Setaria italica	36.84	1.00e-16	79.00
IUUC-Sly-110862	Solanum lycopersicum	49.50	7.00e-48	182.00
IUUC-Stu-112429	Solanum tuberosum	50.66	4.00e-47	180.00
IUUC-Sbi-114427	Sorghum bicolor	50.36	7.00e-32	130.00
IUUC-Tca-121232	Theobroma cacao	57.04	1.00e-63	235.00
IUUC-Tae-125140	Triticum aestivum	46.10	5.00e-29	121.00
IUUC-Tur-126264	Triticum urartu	35.71	1.00e-27	115.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence