iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131751

UUCD1 version

UUC-ViV-00911

Ensembl Protein ID

VIT_04s0044g00870.t01

UniProt Accession

F6I0G9; F6I0G9_VITVI

Genbank Protein ID

CCB60435.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN596506

Gene Name

VIT_04s0044g00870

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_04s0044g00870	VIT_04s0044g00870.t01	VIT_04s0044g00870.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.10e-30	105.2	10	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           vp+ f+CpIsl++M+ Pv l++G+tydrssI++wl++g++tcP t+q l+++d+vPn+tl+rliq w ++ 
   Q: 10   VPSLFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLHSKDFVPNHTLQRLIQIWSNSV 80
           89*****************************************************************9876 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MVRDNLFITV PSLFRCPISL DVMKSPVSLC TGVTYDRSSI QRWLDNGNNT CPATMQVLHS 60
KDFVPNHTLQ RLIQIWSNSV RHRSNSPDSP IQLVPSLSPD QARDLIKEIE SKPEDCLECM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCTCTCTC TTCTTAAATC CTCCCTTCGC TGCCCTTTTT TTCTGTTCTT CTTCGTCTTC 60
TTCAGCAGCT CTACTGCTCT TCCAGCAAAA TAATTCTGTG CTTTCGCAGA AGTTGAAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

vvi:100264434

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002532	Amborella trichopoda	50.12	5.00e-110	390.00
IUUC-Aly-005744	Arabidopsis lyrata	53.33	5.00e-112	396.00
IUUC-Ath-007332	Arabidopsis thaliana	53.92	1.00e-112	399.00
IUUC-Bdi-014371	Brachypodium distachyon	37.22	3.00e-39	155.00
IUUC-Bol-015831	Brassica oleracea	53.32	3.00e-123	434.00
IUUC-Bra-017320	Brassica rapa	53.55	1.00e-118	419.00
IUUC-Gma-042668	Glycine max	64.59	2.00e-140	491.00
IUUC-Lpe-050922	Leersia perrieri	68.97	8.00e-21	94.00
IUUC-Mtr-057795	Medicago truncatula	62.92	7.00e-146	509.00
IUUC-Mac-064700	Musa acuminata	39.34	2.00e-61	228.00
IUUC-Obr-076531	Oryza brachyantha	67.24	8.00e-20	90.50
IUUC-Ogl-077245	Oryza glaberrima	68.97	8.00e-21	94.00
IUUC-Ogu-078852	Oryza glumaepatula	39.48	3.00e-38	152.00
IUUC-Oin-079861	Oryza indica	39.22	7.00e-38	150.00
IUUC-Ome-081099	Oryza meridionalis	41.30	3.00e-40	158.00
IUUC-Oni-083066	Oryza nivara	39.22	7.00e-38	150.00
IUUC-Opu-083818	Oryza punctata	39.66	9.00e-34	137.00
IUUC-Oru-085038	Oryza rufipogon	42.69	4.00e-33	135.00
IUUC-Osa-086178	Oryza sativa	38.96	6.00e-35	140.00
IUUC-Pop-099916	Populus trichocarpa	58.47	4.00e-138	483.00
IUUC-Ppe-101668	Prunus persica	63.92	2.00e-148	518.00
IUUC-Sit-110134	Setaria italica	75.00	2.00e-29	122.00
IUUC-Sly-111549	Solanum lycopersicum	50.82	2.00e-115	408.00
IUUC-Stu-112738	Solanum tuberosum	50.12	7.00e-114	402.00
IUUC-Sbi-114135	Sorghum bicolor	57.01	4.00e-29	121.00
IUUC-Tca-121270	Theobroma cacao	60.44	2.00e-137	481.00
IUUC-Tae-124143	Triticum aestivum	39.09	7.00e-35	140.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence