iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__3469__AT2G18650.1	fgenesh2_kg.3__3469__AT2G18650.1	fgenesh2_kg.3__3469__AT2G18650.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-06	29.7	117	159

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f  +d +++lp C H+fh +C+  w         + +CPlCr
   Q: 117  CPVCLCEFetEDKLRLLPkCSHAFHVECIDTW------LLSHSTCPLCR 159
           ********77555999****************......89999*****8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MNKNLISSSP PPPPLIPLKS NTSFDLNNKI TPNILLIIII LSIIFFISGL LHILVKFLLT 60
PSTQNREDYF DNVTALQGQL QQLFNLHDSG VDQSLIDTLP VFHYKSIIGL KISPFDCPVC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACAAGA ATTTGATCTC TTCTTCACCA CCACCACCAC CATTGATACC TCTCAAATCA 60
AACACAAGCT TCGATTTAAA CAACAAAATC ACACCAAATA TTCTTCTAAT AATCATAATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding
GO:0009793--P:embryo development ending in seed dormancy

KEGG

aly:ARALYDRAFT_480768

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007441	Arabidopsis thaliana	88.49	4.00e-150	523.00
IUUC-Bdi-014076	Brachypodium distachyon	41.41	1.00e-36	145.00
IUUC-Bol-016576	Brassica oleracea	73.46	2.00e-136	478.00
IUUC-Bra-017334	Brassica rapa	72.37	2.00e-132	464.00
IUUC-Hvu-047392	Hordeum vulgare	42.44	6.00e-49	187.00
IUUC-Mvi-060468	Microbotryum violaceum	64.58	3.00e-12	66.60
IUUC-Mac-064684	Musa acuminata	48.32	1.00e-59	223.00
IUUC-Oba-075403	Oryza barthii	43.94	3.00e-53	202.00
IUUC-Obr-076503	Oryza brachyantha	46.15	4.00e-48	184.00
IUUC-Ogl-077574	Oryza glaberrima	43.66	4.00e-54	205.00
IUUC-Ogu-077986	Oryza glumaepatula	43.66	4.00e-54	205.00
IUUC-Oin-079091	Oryza indica	43.94	9.00e-55	207.00
IUUC-Ome-081627	Oryza meridionalis	44.83	2.00e-52	199.00
IUUC-Oni-082260	Oryza nivara	43.66	4.00e-54	204.00
IUUC-Opu-083578	Oryza punctata	43.75	2.00e-54	206.00
IUUC-Oru-084794	Oryza rufipogon	43.66	4.00e-54	205.00
IUUC-Osa-085348	Oryza sativa	43.66	4.00e-54	205.00
IUUC-Stu-112868	Solanum tuberosum	44.65	1.00e-75	276.00
IUUC-Sbi-114154	Sorghum bicolor	34.76	7.00e-41	160.00
IUUC-Tae-123223	Triticum aestivum	40.07	3.00e-45	175.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence