iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000018691.10	ENSDART00000045942.7	ENSDARP00000045941.6
ENSDARG00000018691.10	ENSDART00000125352.2	ENSDARP00000111663.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	6.10e-11	43.2	6	55

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C +C+ +++ ++ ++eC+ C++wfH  C++   e+e p+ + + Cp+C++
   Q: 6    VYC-ICRLPYDVTQFMIECDACKDWFHGSCVGVD-EDEAPDIDIYHCPNCEK 55
           69*.******************************.*******99******86 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MATVPVYCIC RLPYDVTQFM IECDACKDWF HGSCVGVDED EAPDIDIYHC PNCEKTHGKS 60
TLKKKKSWNK HDTGQSGDVR PVQNGSQVFI KELRSRTFPS SEDVVVKLSG SQLTLEYLEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTATAACCGC ATGAGCCCTT ATTAACGTGT CACAGACTCT GCTGCAGCTG CTTCGACGGT 60
CGGCTGGAGA TCCTGCCGGT GGATTTTCGT CTTTCTCTCG TCCCGGGAAA CCCTAAGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003347--JmjC_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51184--JMJC
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF02373--JmjC
PF00628--PHD

SMART

SM00558--JmjC
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002986	Amborella trichopoda	44.00	2.00e-11	62.00
IUUC-Aca-005043	Anolis carolinensis	83.30	0.00e+00	820.00
IUUC-Ame-011579	Astyanax mexicanus	72.53	0.00e+00	632.00
IUUC-Bdi-014153	Brachypodium distachyon	41.82	4.00e-12	65.10
IUUC-Fal-037017	Ficedula albicollis	80.68	0.00e+00	827.00
IUUC-Gmo-038789	Gadus morhua	62.19	0.00e+00	642.00
IUUC-Gga-040290	Gallus gallus	81.21	0.00e+00	825.00
IUUC-Hsa-046760	Homo sapiens	76.78	0.00e+00	811.00
IUUC-Hvu-047723	Hordeum vulgare	32.10	1.00e-10	60.10
IUUC-Lpe-051400	Leersia perrieri	43.64	5.00e-12	64.70
IUUC-Loc-051927	Lepisosteus oculatus	85.22	0.00e+00	859.00
IUUC-Mmr-061132	Microcebus murinus	76.58	0.00e+00	807.00
IUUC-Mmu-063458	Mus musculus	79.18	0.00e+00	804.00
IUUC-Mac-065355	Musa acuminata	43.14	2.00e-11	62.00
IUUC-Ont-071935	Oreochromis niloticus	87.30	0.00e+00	837.00
IUUC-Oba-075188	Oryza barthii	43.64	2.00e-11	62.40
IUUC-Obr-076457	Oryza brachyantha	33.72	5.00e-11	61.20
IUUC-Ogl-077260	Oryza glaberrima	43.64	2.00e-11	62.80
IUUC-Ogu-078663	Oryza glumaepatula	43.64	3.00e-12	65.10
IUUC-Oin-079894	Oryza indica	43.64	3.00e-12	65.10
IUUC-Olo-080411	Oryza longistaminata	43.64	1.00e-12	66.20
IUUC-Ome-081623	Oryza meridionalis	43.64	4.00e-12	64.70
IUUC-Oni-082587	Oryza nivara	43.64	3.00e-12	65.10
IUUC-Opu-083591	Oryza punctata	41.82	1.00e-11	63.20
IUUC-Oru-084597	Oryza rufipogon	43.64	3.00e-12	65.50
IUUC-Osa-086057	Oryza sativa	43.64	3.00e-12	65.10
IUUC-Ola-087236	Oryzias latipes	87.85	0.00e+00	842.00
IUUC-Ptr-091328	Pan troglodytes	80.89	0.00e+00	798.00
IUUC-Pfo-096227	Poecilia formosa	75.37	0.00e+00	1440.00
IUUC-Pop-098853	Populus trichocarpa	39.73	1.00e-12	66.60
IUUC-Sit-110411	Setaria italica	45.76	2.00e-13	69.30
IUUC-Sly-111450	Solanum lycopersicum	46.00	8.00e-12	63.90
IUUC-Stu-112123	Solanum tuberosum	46.00	2.00e-11	62.80
IUUC-Sbi-114098	Sorghum bicolor	47.27	5.00e-13	67.80
IUUC-Tgu-117091	Taeniopygia guttata	80.25	0.00e+00	822.00
IUUC-Tru-118118	Takifugu rubripes	70.22	0.00e+00	1420.00
IUUC-Tni-120632	Tetraodon nigroviridis	85.07	0.00e+00	899.00
IUUC-Tae-125802	Triticum aestivum	41.82	3.00e-12	65.90
IUUC-Tur-126461	Triticum urartu	41.82	1.00e-12	66.20
IUUC-Ttr-128194	Tursiops truncatus	79.83	0.00e+00	803.00
IUUC-Vvi-131614	Vitis vinifera	46.00	1.00e-11	63.20
IUUC-Xma-134037	Xiphophorus maculatus	75.39	0.00e+00	1434.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence