iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000107

Ensembl Protein ID

EMT11156

UniProt Accession

M8BAX8; M8BAX8_AEGTA

Genbank Protein ID

EMT11156.1

Protein Name

RING-H2 finger protein ATL3B

Genbank Nucleotide ID

KD555769

Gene Name

F775_20229

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_20229	EMT11156	EMT11156

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.20e-09	37.9	82	124

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f+d+  +++lp C Hvfh dC++ w         +++CP+Cr
   Q: 82   CAVCLSEFDDEetLRLLPkCSHVFHPDCINTW------LASHITCPVCR 124
           ********6655599999**************......**********8 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MGPAPCTNGL LIVLLLVLAV ADFGSGQQNP PPPGAYYTAK FSPSRATVII VLIVILVFHR 60
RTPTMAYADV KEHKAVKGAL ECAVCLSEFD DEETLRLLPK CSHVFHPDCI NTWLASHITC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGCCGG CACCCTGCAC CAATGGCCTC CTCATCGTCC TCCTCCTCGT GCTCGCCGTG 60
GCCGACTTCG GGTCGGGGCA GCAGAACCCG CCTCCGCCAG GGGCGTACTA CACGGCGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0472--Membrane
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

ats:F775_20229

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002716	Amborella trichopoda	40.10	3.00e-29	122.00
IUUC-Aly-005713	Arabidopsis lyrata	38.26	2.00e-33	135.00
IUUC-Ath-006746	Arabidopsis thaliana	39.00	4.00e-33	134.00
IUUC-Bdi-014474	Brachypodium distachyon	93.55	3.00e-33	135.00
IUUC-Bol-016195	Brassica oleracea	38.52	5.00e-33	134.00
IUUC-Bra-017899	Brassica rapa	40.22	2.00e-31	129.00
IUUC-Gma-043288	Glycine max	42.92	7.00e-35	140.00
IUUC-Hvu-047493	Hordeum vulgare	70.42	2.00e-53	202.00
IUUC-Lpe-051270	Leersia perrieri	52.34	7.00e-52	197.00
IUUC-Mtr-058006	Medicago truncatula	40.32	3.00e-39	154.00
IUUC-Mdo-063028	Monodelphis domestica	28.89	4.00e-13	68.60
IUUC-Mac-064577	Musa acuminata	43.02	8.00e-28	117.00
IUUC-Oba-075528	Oryza barthii	58.94	5.00e-43	167.00
IUUC-Obr-076839	Oryza brachyantha	53.83	2.00e-70	258.00
IUUC-Ogl-076953	Oryza glaberrima	58.56	4.00e-42	164.00
IUUC-Ogu-078122	Oryza glumaepatula	59.16	4.00e-46	177.00
IUUC-Oin-079189	Oryza indica	58.75	1.00e-45	176.00
IUUC-Olo-080975	Oryza longistaminata	43.67	4.00e-34	137.00
IUUC-Ome-081499	Oryza meridionalis	83.82	9.00e-32	130.00
IUUC-Oni-082648	Oryza nivara	57.92	5.00e-42	164.00
IUUC-Opu-083745	Oryza punctata	61.07	3.00e-53	201.00
IUUC-Oru-084417	Oryza rufipogon	58.94	6.00e-43	167.00
IUUC-Osa-085388	Oryza sativa	59.30	7.00e-44	170.00
IUUC-Ppa-095490	Physcomitrella patens	48.28	1.00e-20	92.80
IUUC-Pop-099263	Populus trichocarpa	39.56	1.00e-29	122.00
IUUC-Ppe-101166	Prunus persica	42.06	2.00e-37	148.00
IUUC-Smo-109603	Selaginella moellendorffii	59.26	5.00e-18	81.30
IUUC-Sit-109787	Setaria italica	63.32	9.00e-47	180.00
IUUC-Sly-111292	Solanum lycopersicum	37.02	5.00e-36	144.00
IUUC-Stu-112111	Solanum tuberosum	37.58	4.00e-38	151.00
IUUC-Sbi-114136	Sorghum bicolor	92.42	2.00e-34	139.00
IUUC-Tca-120966	Theobroma cacao	38.35	1.00e-35	142.00
IUUC-Tae-123895	Triticum aestivum	98.91	1.00e-127	448.00
IUUC-Tur-126210	Triticum urartu	83.08	1.00e-30	124.00
IUUC-Vvi-131694	Vitis vinifera	45.36	2.00e-32	132.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence