iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114073

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765

Gene Name

SORBI_006G197600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g027220	Sb02g027220.1	Sb02g027220.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.20e-07	32.1	166	208

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl +f+dg  +++lp C H fha C+  w       + + +CP+Cr
   Q: 166  CAVCLGEFSDGelVRLLPrCAHPFHAPCIDTW------LRAHVNCPICR 208
           ********88888999999*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MYTVRPHAAT STVILNCTEA PLDCLPLCPG GGEAPCSAYA LPPPPPLPVI PRAPVAADRH 60
APVRLLLVIS LLSAFLFLSL ALSTLLLYRR RRLILRRRRR LAAAAAAEGA DDDDGGGGFG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGAACCAGC CCACCACCAC CGCCCCCTCT CCAATGCGCG CCGCCGAGCC CGAGCCGACT 60
CCGCCGCCGC CGCCGCTGTC CCAGCCAAGG TAGCCAGCCA TGTACACGGT GCGCCCGCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_06g026980

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014821	Brachypodium distachyon	72.69	4.00e-80	290.00
IUUC-Hvu-047345	Hordeum vulgare	69.96	2.00e-73	267.00
IUUC-Lpe-050980	Leersia perrieri	69.23	1.00e-66	245.00
IUUC-Oba-075496	Oryza barthii	72.27	1.00e-68	252.00
IUUC-Obr-076636	Oryza brachyantha	71.23	1.00e-69	255.00
IUUC-Ogl-077828	Oryza glaberrima	72.27	1.00e-68	252.00
IUUC-Ogu-078954	Oryza glumaepatula	68.87	4.00e-68	251.00
IUUC-Oin-080127	Oryza indica	73.53	3.00e-66	244.00
IUUC-Olo-080396	Oryza longistaminata	70.70	2.00e-56	211.00
IUUC-Ome-081996	Oryza meridionalis	71.43	5.00e-67	247.00
IUUC-Oni-082344	Oryza nivara	73.53	2.00e-66	246.00
IUUC-Opu-083515	Oryza punctata	68.07	6.00e-63	233.00
IUUC-Oru-084771	Oryza rufipogon	73.53	3.00e-66	244.00
IUUC-Osa-085587	Oryza sativa	71.04	1.00e-54	206.00
IUUC-Sit-110541	Setaria italica	85.77	1.00e-93	335.00
IUUC-Tae-124820	Triticum aestivum	72.80	7.00e-87	313.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence