iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014465

UUCD1 version

UUC-BrD-01636

Ensembl Protein ID

BRADI3G43200.1

UniProt Accession

I1I9L4; I1I9L4_BRADI

Genbank Protein ID

KQJ99427.1; KQJ99428.1; KQJ99429.1

Protein Name

Ubiquitinyl hydrolase 1

Genbank Nucleotide ID

CM000882; CM000882; CM000882

Gene Name

LOC100834637; BRADI_3g43200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G43200	BRADI3G43200.1	BRADI3G43200.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	8.40e-68	229.6	204	657

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaeefsgyeqqDaqE 94
           Gl NlgNtC++N+vLQ+L+++  lr+ +            p+ p g+l++ l+klf e    ++  +a s ++l+++++++ ++f+gy+ qD++E
   Q: 204  GLPNLGNTCFFNAVLQSLLALDRLRSKMSG----------PDVPAGALAMLLKKLFLETSasNDAGGALSVKSLFSSICSKYPQFRGYQMQDSHE 288
           9**************************999..........345789**********99987788888**************************** PP
   S: 95   flaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkke.... 185
           +l+++ld+l++e +                e+ +  e+  ++  +++++ +F+gql+s++   ec + s+++++fldlslpvp+++  +k+    
   Q: 289  LLRCFLDGLRTEET----------------EARKLLEDASNSGAPTIVDSIFGGQLSSTVSSTECTHGSVKHDQFLDLSLPVPSRRPPAKSvssp 367
           ***********992................2333445678999****************************************9998888899** PP
   S: 186  ............................................................................................... 185
                                                                                                          
   Q: 368  pakrtkqsirdrnknrrygkitttrisptivenskekaetvaecndsqilgselgqivsekepepsegsescasvpkqelnaasyveddiswldf 462
           *********************************************************************************************** PP
   S: 186  ............................................................................................... 185
                                                                                                          
   Q: 463  vadadetkseildsvcsteagqiwdrngemhgsydtrddtlpkekvmssehscenivddaacsqpvillpykefcttadeicetvrssqcpkdvg 557
           *********************************************************************************************** PP
   S: 186  ........................................................................slqdcLesftkeeelegenkyyc 208
                                                                                   s++ cL+ +t++e l   + ++c
   Q: 558  papdispvtennthpvsggngeqddyiglgdmfnepevtseakkettagvidvmawssnsaddevddsnalvSVEGCLALYTEPELLS--ELWHC 650
           ***************************************************************************************8..58*** PP
   S: 209  ekckkkq 215
           e+c + +
   Q: 651  EHCSSAV 657
           ***9755 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MGKKLKTKAK KAQQREPLAA AGSGDAGLQE ASNSTEEAAV SASDWQQCGH YGRDSPHLDK 60
VLREIMSSKH LASCEHCRED APRKKGGKQQ KKKGGGGAAK AQAKVEKSDM WICLDCGRHF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGAAGA AGCTGAAGAC CAAAGCCAAG AAAGCGCAGC AGCGGGAACC GCTGGCCGCT 60
GCTGGATCCG GCGATGCGGG GTTGCAGGAA GCGAGTAACT CAACAGAGGA AGCGGCTGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

bdi:100834637

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000997	Aegilops tauschii	74.55	0.00e+00	1390.00
IUUC-Atr-003015	Amborella trichopoda	31.45	7.00e-62	231.00
IUUC-Aly-005494	Arabidopsis lyrata	31.47	1.00e-50	194.00
IUUC-Ath-007211	Arabidopsis thaliana	36.84	3.00e-50	192.00
IUUC-Bta-013362	Bos taurus	30.55	3.00e-31	129.00
IUUC-Bra-016751	Brassica rapa	36.27	3.00e-46	179.00
IUUC-Cja-019177	Callithrix jacchus	32.09	1.00e-32	134.00
IUUC-Csa-024103	Chlorocebus sabaeus	32.18	2.00e-32	133.00
IUUC-Cho-024315	Choloepus hoffmanni	41.96	7.00e-18	85.10
IUUC-Csv-026075	Ciona savignyi	29.73	2.00e-17	83.60
IUUC-Cme-027348	Cyanidioschyzon merolae	36.03	2.00e-18	86.70
IUUC-Dre-028388	Danio rerio	37.56	6.00e-28	118.00
IUUC-Eca-033479	Equus caballus	30.84	3.00e-31	129.00
IUUC-Fca-036320	Felis catus	31.21	1.00e-31	130.00
IUUC-Ggo-045598	Gorilla gorilla	32.09	7.00e-33	135.00
IUUC-Hsa-046598	Homo sapiens	32.09	6.00e-33	135.00
IUUC-Hvu-047146	Hordeum vulgare	74.18	0.00e+00	1384.00
IUUC-Itr-047951	Ictidomys tridecemlineatus	31.52	3.00e-34	139.00
IUUC-Lpe-050703	Leersia perrieri	66.19	0.00e+00	1211.00
IUUC-Laf-053732	Loxodonta africana	30.86	4.00e-31	129.00
IUUC-Mcc-054661	Macaca mulatta	32.18	3.00e-32	133.00
IUUC-Meu-055967	Macropus eugenii	31.84	5.00e-20	92.40
IUUC-Mmr-061747	Microcebus murinus	31.12	3.00e-31	129.00
IUUC-Mac-064941	Musa acuminata	38.63	5.00e-103	368.00
IUUC-Mlu-067511	Myotis lucifugus	38.14	8.00e-31	128.00
IUUC-Nle-069252	Nomascus leucogenys	32.29	1.00e-32	134.00
IUUC-Opr-070969	Ochotona princeps	37.67	8.00e-30	124.00
IUUC-Ocu-074704	Oryctolagus cuniculus	30.46	5.00e-32	132.00
IUUC-Oba-075094	Oryza barthii	68.14	0.00e+00	1241.00
IUUC-Obr-076743	Oryza brachyantha	65.91	0.00e+00	1187.00
IUUC-Ogl-077739	Oryza glaberrima	64.62	0.00e+00	978.00
IUUC-Ogu-078851	Oryza glumaepatula	68.14	0.00e+00	1243.00
IUUC-Oin-079402	Oryza indica	68.14	0.00e+00	1243.00
IUUC-Olo-080431	Oryza longistaminata	67.59	0.00e+00	1203.00
IUUC-Ome-081580	Oryza meridionalis	67.16	0.00e+00	1230.00
IUUC-Oni-082644	Oryza nivara	68.14	0.00e+00	1243.00
IUUC-Opu-083452	Oryza punctata	67.65	0.00e+00	1241.00
IUUC-Oru-084546	Oryza rufipogon	68.34	0.00e+00	1244.00
IUUC-Osa-085858	Oryza sativa	68.04	0.00e+00	1240.00
IUUC-Oga-088713	Otolemur garnettii	31.32	3.00e-32	132.00
IUUC-Oar-089971	Ovis aries	30.46	5.00e-31	129.00
IUUC-Ptr-091670	Pan troglodytes	32.09	7.00e-33	135.00
IUUC-Pan-092293	Papio anubis	32.18	3.00e-32	133.00
IUUC-Psi-093101	Pelodiscus sinensis	29.91	9.00e-28	118.00
IUUC-Ppa-095584	Physcomitrella patens	29.55	5.00e-38	152.00
IUUC-Pab-098773	Pongo abelii	37.21	2.00e-29	123.00
IUUC-Pop-099136	Populus trichocarpa	31.51	1.00e-66	247.00
IUUC-Ppe-101794	Prunus persica	33.22	1.00e-63	237.00
IUUC-Rno-105237	Rattus norvegicus	28.82	3.00e-29	123.00
IUUC-Sha-106889	Sarcophilus harrisii	31.52	2.00e-28	120.00
IUUC-Sja-107712	Schizosaccharomyces japonicus	33.55	2.00e-19	90.10
IUUC-Spo-108149	Schizosaccharomyces pombe	38.18	1.00e-23	104.00
IUUC-Sit-110283	Setaria italica	64.76	0.00e+00	1232.00
IUUC-Sly-111491	Solanum lycopersicum	37.58	2.00e-59	223.00
IUUC-Stu-112820	Solanum tuberosum	39.29	4.00e-63	236.00
IUUC-Sbi-113785	Sorghum bicolor	64.83	0.00e+00	1134.00
IUUC-Tae-125305	Triticum aestivum	74.93	0.00e+00	1353.00
IUUC-Tur-126788	Triticum urartu	73.40	0.00e+00	1186.00
IUUC-Ttr-128271	Tursiops truncatus	30.40	2.00e-31	130.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence