iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080919

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN540588.1_FG003	KN540588.1_FGT003	KN540588.1_FGP003

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	2.20e-27	95.6	82	129

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
           ksLLd+tc+ Vadm+ gktpe++R+tF ienDftpeEea++R+En+WA
   Q: 82   KSLLDMTCQRVADMMSGKTPEQMRETFSIENDFTPEEEAAIRQENAWA 129
           89*********************************************9 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MIEDDCTENG VRLPNVDGDI LTMVVDYCNM HVGNGANAGD DTAKGSSSAE EELKKFDAEL 60
VQALENPVLF KLILAANFLN IKSLLDMTCQ RVADMMSGKT PEQMRETFSI ENDFTPEEEA 120

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Nucleotide Sequence
(Fasta)

ATGATCGAGG ACGATTGCAC GGAGAACGGG GTGCGTCTCC CCAACGTCGA CGGCGACATC 60
CTCACCATGG TCGTCGACTA CTGCAACATG CACGTCGGCA ACGGCGCCAA CGCCGGCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Oba-074996	Oryza barthii	87.88	2.00e-61	227.00
IUUC-Ogl-076941	Oryza glaberrima	87.88	2.00e-61	227.00
IUUC-Ogu-078893	Oryza glumaepatula	97.73	1.00e-74	271.00
IUUC-Oin-080120	Oryza indica	93.18	6.00e-68	248.00
IUUC-Oni-082208	Oryza nivara	93.18	6.00e-68	248.00
IUUC-Opu-083972	Oryza punctata	81.82	6.00e-58	215.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence