iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076232

Ensembl Protein ID

OB02G24970.1

UniProt Accession

J3LCY0; J3LCY0_ORYBR

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB02G24970	OB02G24970.1	OB02G24970.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.40e-24	84.7	1	60

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 15   MrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           MrdPvvl+sG+tydr+ I++wl+ g++tcP t+q l+++ l+Pn+ +r++i +wc en++
   Q: 1    MRDPVVLASGQTYDRRFIQEWLSAGNRTCPQTQQVLSNTVLIPNHLVRSMIAQWCTENGI 60
           9********************************************************986 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MRDPVVLASG QTYDRRFIQE WLSAGNRTCP QTQQVLSNTV LIPNHLVRSM IAQWCTENGI 60
ALSPLENQEE DLVTNNERKA FSELFDRISS SSDISEKKQA IKDLRLLTKR NSSFRAVIGE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGAGCACTT CCTCTGCCCT ATCTCGTCGG AGATCATGAG GGACCCCGTC GTCCTCGCGT 60
CCGGTCAGGT AGTTTCCCTT CGCCGTTCCT TTTGATGACG CGTGGGACTC TTGCTCGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006420	Arabidopsis lyrata	51.07	2.00e-105	375.00
IUUC-Ath-007457	Arabidopsis thaliana	51.07	7.00e-107	379.00
IUUC-Bdi-014069	Brachypodium distachyon	84.72	4.00e-178	616.00
IUUC-Bol-015764	Brassica oleracea	50.13	6.00e-104	370.00
IUUC-Bra-017759	Brassica rapa	50.67	8.00e-105	373.00
IUUC-Gma-043611	Glycine max	51.21	4.00e-103	367.00
IUUC-Lpe-050825	Leersia perrieri	92.20	0.00e+00	669.00
IUUC-Mtr-057877	Medicago truncatula	47.57	5.00e-100	357.00
IUUC-Mac-065616	Musa acuminata	68.36	3.00e-136	477.00
IUUC-Oba-075311	Oryza barthii	95.97	0.00e+00	691.00
IUUC-Ogl-077647	Oryza glaberrima	95.97	0.00e+00	691.00
IUUC-Ogu-078448	Oryza glumaepatula	95.97	0.00e+00	690.00
IUUC-Oin-079693	Oryza indica	96.24	0.00e+00	692.00
IUUC-Olo-080462	Oryza longistaminata	96.24	0.00e+00	692.00
IUUC-Ome-081796	Oryza meridionalis	95.96	0.00e+00	685.00
IUUC-Oni-082158	Oryza nivara	96.24	0.00e+00	691.00
IUUC-Opu-084131	Oryza punctata	96.24	0.00e+00	691.00
IUUC-Oru-084335	Oryza rufipogon	96.24	0.00e+00	691.00
IUUC-Osa-085556	Oryza sativa	96.24	0.00e+00	691.00
IUUC-Pop-099806	Populus trichocarpa	51.34	2.00e-109	388.00
IUUC-Ppe-101662	Prunus persica	54.84	2.00e-115	407.00
IUUC-Sit-110812	Setaria italica	81.18	7.00e-170	588.00
IUUC-Sly-110911	Solanum lycopersicum	51.62	5.00e-111	393.00
IUUC-Stu-112732	Solanum tuberosum	51.89	1.00e-111	395.00
IUUC-Sbi-114814	Sorghum bicolor	81.45	3.00e-172	596.00
IUUC-Tca-121080	Theobroma cacao	53.76	9.00e-117	412.00
IUUC-Vvi-131590	Vitis vinifera	54.30	1.00e-116	412.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence