iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-051284

Ensembl Protein ID

LPERR03G10920.1

UniProt Accession

A0A0D9VSH8; A0A0D9VSH8_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR03G10920	LPERR03G10920.1	LPERR03G10920.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.10e-33	115.0	298	370

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+CpIsl+lM+dPv++++G+ty+r +Iekwl+ g+ tcP+t+q+l +++l+Pn++lr+li +wce+n+ 
   Q: 298  IPDDFRCPISLDLMKDPVIVATGQTYERGCIEKWLEAGHDTCPKTQQKLPNKSLTPNYVLRSLIAQWCEANGM 370
           79*******************************************************************9975 PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MEEEANPNPN ADGNTTADSA AAAEAAAASP QPPPPASSSE SAEGKEAKEE EEEEAGDLVG 60
QLVKLVEEIA AISDFRNAYR RQFCNLSRRI RLLAPMLEEA KESPRPLPEA SYSALRRLRE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTCTTCTCT GTTCCAAATC CCCCACGGCG CAATCGCCGC CGCCACCACC ACCACTACTC 60
GACGCCGCCG GCGCCATGGA AGAGGAAGCG AATCCCAACC CTAACGCGGA TGGTAATACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR008709--Neurochondrin
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF05536--Neurochondrin
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001147	Aegilops tauschii	85.76	0.00e+00	917.00
IUUC-Aly-005681	Arabidopsis lyrata	58.13	0.00e+00	702.00
IUUC-Ath-007618	Arabidopsis thaliana	57.97	0.00e+00	701.00
IUUC-Bdi-014772	Brachypodium distachyon	82.41	0.00e+00	1023.00
IUUC-Bol-015254	Brassica oleracea	57.00	0.00e+00	683.00
IUUC-Bra-017857	Brassica rapa	56.84	0.00e+00	675.00
IUUC-Gma-043064	Glycine max	62.94	0.00e+00	782.00
IUUC-Hvu-047052	Hordeum vulgare	84.99	0.00e+00	899.00
IUUC-Lch-050675	Latimeria chalumnae	39.68	1.00e-08	53.90
IUUC-Mtr-058332	Medicago truncatula	61.82	0.00e+00	770.00
IUUC-Mac-065438	Musa acuminata	65.05	0.00e+00	776.00
IUUC-Oba-075184	Oryza barthii	92.59	0.00e+00	1172.00
IUUC-Obr-076590	Oryza brachyantha	89.97	0.00e+00	1163.00
IUUC-Ogl-077386	Oryza glaberrima	92.59	0.00e+00	1172.00
IUUC-Ogu-078326	Oryza glumaepatula	92.59	0.00e+00	1172.00
IUUC-Oin-079687	Oryza indica	92.59	0.00e+00	1172.00
IUUC-Olo-081001	Oryza longistaminata	92.59	0.00e+00	1173.00
IUUC-Ome-081417	Oryza meridionalis	91.82	0.00e+00	1177.00
IUUC-Oni-082379	Oryza nivara	92.44	0.00e+00	1169.00
IUUC-Opu-083774	Oryza punctata	87.45	0.00e+00	1191.00
IUUC-Oru-084885	Oryza rufipogon	92.44	0.00e+00	1170.00
IUUC-Osa-085946	Oryza sativa	92.13	0.00e+00	1162.00
IUUC-Pop-098809	Populus trichocarpa	62.96	0.00e+00	788.00
IUUC-Sit-110369	Setaria italica	86.51	0.00e+00	911.00
IUUC-Sly-111594	Solanum lycopersicum	61.98	0.00e+00	762.00
IUUC-Stu-112876	Solanum tuberosum	60.54	0.00e+00	751.00
IUUC-Sbi-113843	Sorghum bicolor	79.45	0.00e+00	933.00
IUUC-Tca-121745	Theobroma cacao	61.98	0.00e+00	771.00
IUUC-Tae-123188	Triticum aestivum	84.56	0.00e+00	1022.00
IUUC-Tur-126457	Triticum urartu	81.11	0.00e+00	934.00
IUUC-Vvi-131752	Vitis vinifera	63.90	0.00e+00	766.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence