iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ptr-090869

Ensembl Protein ID

ENSPTRP00000020195.1

UniProt Accession

H2QHL6; H2QHL6_PANTR

Genbank Protein ID

JAA02976.1; JAA12607.1; JAA27832.1; JAA37235.1

Protein Name

Prolactin regulatory element binding

Genbank Nucleotide ID

AACZ03014085; GABF01009538; GABD01005268; GABE01007504

Gene Name

PREB

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000011751.4	ENSPTRT00000021891.1	ENSPTRP00000020195.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.10e-09	35.7	160	185

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf.sd.tllvsGsdDgtikvWDlrt 32
           ++f +d tll++G+ Dg ++vW + +
   Q: 160  VCFnHDtTLLATGGTDGYVRVWKVPS 185
           5688677***************9865 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MGRRRAPELY RAPFPLYALQ VDPSTGLLIA AGGGGAAKTG IKNGVHFLQL ERINGRLSAS 60
LLHSHDTETR ATMNLALAGD ILAAGQDAHC QLLRFQAHQQ QGNKAEKAGS KEQGPRQRKG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTGCGCGGA GGGAGCCGCG AGACGGGTGC GCATGCGCAG TGCGCGTCTG CGAGACCGAC 60
TTGGACGGAG CCGAGCTGAG GCTCGGCTTC CTGCTGGTGG TCAGGGTTTT GGCAACTCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0677--Repeat
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0070971--C:endoplasmic reticulum exit site
GO:0030176--C:integral component of endoplasmic reticulum membrane
GO:0005634--C:nucleus
GO:0005096--F:GTPase activator activity
GO:0051020--F:GTPase binding
GO:0005090--F:Sar guanyl-nucleotide exchange factor activity
GO:0032527--P:protein exit from endoplasmic reticulum
GO:0009306--P:protein secretion
GO:0003400--P:regulation of COPII vesicle coating

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001671	Ailuropoda melanoleuca	91.67	0.00e+00	681.00
IUUC-Atr-002477	Amborella trichopoda	25.88	4.00e-11	62.00
IUUC-Ath-007466	Arabidopsis thaliana	27.00	5.00e-12	65.50
IUUC-Ame-010812	Astyanax mexicanus	51.56	1.00e-65	242.00
IUUC-Bta-012386	Bos taurus	92.34	0.00e+00	726.00
IUUC-Bdi-014110	Brachypodium distachyon	27.17	2.00e-19	90.10
IUUC-Bra-017708	Brassica rapa	28.11	7.00e-15	74.70
IUUC-Cel-018480	Caenorhabditis elegans	24.05	4.00e-20	92.40
IUUC-Cja-018998	Callithrix jacchus	95.64	0.00e+00	779.00
IUUC-Cfa-020666	Canis familiaris	92.58	0.00e+00	718.00
IUUC-Cpo-022030	Cavia porcellus	84.05	0.00e+00	650.00
IUUC-Csa-023521	Chlorocebus sabaeus	98.33	0.00e+00	754.00
IUUC-Cin-025431	Ciona intestinalis	31.52	1.00e-47	184.00
IUUC-Dre-027832	Danio rerio	55.53	3.00e-130	458.00
IUUC-Dno-028989	Dasypus novemcinctus	89.71	0.00e+00	732.00
IUUC-Dme-031901	Drosophila melanogaster	31.84	8.00e-50	191.00
IUUC-Ete-032290	Echinops telfairi	90.67	0.00e+00	694.00
IUUC-Eca-033917	Equus caballus	93.30	0.00e+00	731.00
IUUC-Fca-036323	Felis catus	93.06	0.00e+00	732.00
IUUC-Gmo-038693	Gadus morhua	56.74	5.00e-131	460.00
IUUC-Gga-040702	Gallus gallus	66.83	4.00e-143	501.00
IUUC-Gac-042635	Gasterosteus aculeatus	54.92	1.00e-117	416.00
IUUC-Gma-043946	Glycine max	28.21	6.00e-19	88.20
IUUC-Ggo-044648	Gorilla gorilla	98.32	0.00e+00	724.00
IUUC-Hsa-046003	Homo sapiens	99.52	0.00e+00	765.00
IUUC-Itr-048613	Ictidomys tridecemlineatus	91.85	0.00e+00	710.00
IUUC-Lch-049473	Latimeria chalumnae	60.38	2.00e-142	498.00
IUUC-Lpe-051586	Leersia perrieri	26.10	3.00e-18	86.30
IUUC-Loc-052177	Lepisosteus oculatus	60.19	2.00e-140	492.00
IUUC-Laf-054366	Loxodonta africana	93.30	0.00e+00	722.00
IUUC-Mcc-055775	Macaca mulatta	98.09	0.00e+00	753.00
IUUC-Meu-056562	Macropus eugenii	79.19	8.00e-164	569.00
IUUC-Mtr-058661	Medicago truncatula	28.21	2.00e-18	86.70
IUUC-Mvi-060443	Microbotryum violaceum	23.12	1.00e-10	60.80
IUUC-Mmr-061126	Microcebus murinus	94.50	0.00e+00	707.00
IUUC-Mdo-062928	Monodelphis domestica	79.29	1.00e-165	575.00
IUUC-Mmu-064083	Mus musculus	88.25	0.00e+00	638.00
IUUC-Mac-064955	Musa acuminata	27.43	3.00e-16	79.30
IUUC-Mpu-066857	Mustela putorius furo	90.43	0.00e+00	741.00
IUUC-Mlu-067891	Myotis lucifugus	92.58	0.00e+00	708.00
IUUC-Nle-070030	Nomascus leucogenys	96.64	0.00e+00	732.00
IUUC-Opr-070864	Ochotona princeps	91.42	9.00e-133	466.00
IUUC-Ont-072204	Oreochromis niloticus	58.43	8.00e-129	453.00
IUUC-Oan-073643	Ornithorhynchus anatinus	72.73	7.00e-122	429.00
IUUC-Ocu-074217	Oryctolagus cuniculus	90.67	0.00e+00	664.00
IUUC-Oba-075587	Oryza barthii	26.82	2.00e-17	83.20
IUUC-Obr-076826	Oryza brachyantha	25.19	9.00e-19	87.80
IUUC-Ogl-077927	Oryza glaberrima	25.10	3.00e-18	85.90
IUUC-Ogu-078241	Oryza glumaepatula	25.10	5.00e-18	85.50
IUUC-Oin-080217	Oryza indica	25.10	8.00e-18	84.70
IUUC-Olo-081060	Oryza longistaminata	25.00	6.00e-18	85.10
IUUC-Ome-082007	Oryza meridionalis	25.10	3.00e-18	86.30
IUUC-Oni-082827	Oryza nivara	25.10	8.00e-18	84.70
IUUC-Opu-083159	Oryza punctata	25.30	2.00e-17	83.20
IUUC-Oru-085039	Oryza rufipogon	25.10	8.00e-18	84.70
IUUC-Osa-086258	Oryza sativa	25.10	8.00e-18	84.70
IUUC-Ola-087223	Oryzias latipes	57.48	5.00e-120	424.00
IUUC-Oga-088417	Otolemur garnettii	90.67	0.00e+00	678.00
IUUC-Oar-090435	Ovis aries	92.11	0.00e+00	725.00
IUUC-Pan-092527	Papio anubis	98.33	0.00e+00	754.00
IUUC-Pma-094156	Petromyzon marinus	55.18	8.00e-117	413.00
IUUC-Ppa-095904	Physcomitrella patens	28.11	2.00e-12	66.60
IUUC-Pfo-097488	Poecilia formosa	52.57	3.00e-122	431.00
IUUC-Pab-097720	Pongo abelii	98.32	0.00e+00	753.00
IUUC-Pop-099618	Populus trichocarpa	28.57	7.00e-21	94.70
IUUC-Pca-100288	Procavia capensis	79.95	1.00e-172	598.00
IUUC-Ppe-101864	Prunus persica	27.46	1.00e-12	67.40
IUUC-Pva-103192	Pteropus vampyrus	93.54	0.00e+00	724.00
IUUC-Rno-106123	Rattus norvegicus	89.45	0.00e+00	647.00
IUUC-Sha-107169	Sarcophilus harrisii	80.24	9.00e-167	579.00
IUUC-Smo-109265	Selaginella moellendorffii	26.67	3.00e-13	69.70
IUUC-Sly-111551	Solanum lycopersicum	26.40	1.00e-13	70.90
IUUC-Stu-112264	Solanum tuberosum	26.40	2.00e-12	67.00
IUUC-Sar-113218	Sorex araneus	84.62	2.00e-108	384.00
IUUC-Ssc-115282	Sus scrofa	92.29	0.00e+00	700.00
IUUC-Tru-117866	Takifugu rubripes	55.66	4.00e-119	421.00
IUUC-Tca-121083	Theobroma cacao	27.51	1.00e-16	80.50
IUUC-Tae-124218	Triticum aestivum	26.77	8.00e-18	84.00
IUUC-Ttr-128585	Tursiops truncatus	90.19	0.00e+00	667.00
IUUC-Vvi-131024	Vitis vinifera	28.12	2.00e-18	86.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence