iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-120952

Ensembl Protein ID

EOY21331

UniProt Accession

A0A061FVR8; A0A061FVR8_THECC

Genbank Protein ID

EOY21331.1

Protein Name

Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

CM001881

Gene Name

TCM_012815

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_012815	EOY21331	EOY21331

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.50e-21	75.0	282	319

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsd.tllvsGsdDgtikvWDlrtgvllk 37
           gHt  vt ++f d  ++vs++ Dg +k+W++++ +l++
   Q: 282  GHTKTVTYVRFLDaQTMVSAGTDGYLKLWNISDSRLIR 319
           8**********666789*************99888766 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MGAFHWTRGP KTASASISIS NEWAMKNLSS RLHLPDPVPG RERRDYAKES IAKDKPEGEE 60
DQERARCEWD FSLSTVVSTS AEAAVSDTLG VIEFDPSNTV VATGGIARKI RIYTLNSLLP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGTACACTCC TTCTTCATGA AAAATTTCGA CACTGAATAA AATATTAATA TTTTAATATT 60
ATTTTATTAA TAAAATATTA TTTTATTTCA AAATTTTTCA CTTGTCTCTT TGGTACCCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002851	Amborella trichopoda	47.16	7.00e-92	330.00
IUUC-Aly-005431	Arabidopsis lyrata	63.35	4.00e-121	427.00
IUUC-Ath-006939	Arabidopsis thaliana	64.10	9.00e-116	409.00
IUUC-Bdi-014616	Brachypodium distachyon	46.31	8.00e-66	243.00
IUUC-Bol-016424	Brassica oleracea	63.06	4.00e-108	383.00
IUUC-Bra-016672	Brassica rapa	58.54	3.00e-114	404.00
IUUC-Cre-022579	Chlamydomonas reinhardtii	32.64	7.00e-40	156.00
IUUC-Lma-053206	Leptosphaeria maculans	30.65	2.00e-09	58.20
IUUC-Ogl-077687	Oryza glaberrima	43.16	3.00e-62	231.00
IUUC-Oin-079632	Oryza indica	42.67	4.00e-61	227.00
IUUC-Ome-081923	Oryza meridionalis	42.13	2.00e-58	219.00
IUUC-Oni-082448	Oryza nivara	42.67	2.00e-61	228.00
IUUC-Opu-083787	Oryza punctata	44.03	8.00e-75	273.00
IUUC-Oru-085278	Oryza rufipogon	42.13	2.00e-58	219.00
IUUC-Ppa-095960	Physcomitrella patens	35.99	2.00e-57	216.00
IUUC-Pop-099510	Populus trichocarpa	64.30	2.00e-142	497.00
IUUC-Ppe-102088	Prunus persica	64.66	1.00e-136	478.00
IUUC-Smo-109171	Selaginella moellendorffii	33.82	6.00e-55	207.00
IUUC-Sly-111536	Solanum lycopersicum	62.98	5.00e-132	462.00
IUUC-Stu-112915	Solanum tuberosum	62.53	2.00e-133	468.00
IUUC-Tae-123036	Triticum aestivum	42.90	7.00e-65	240.00
IUUC-Vvi-131711	Vitis vinifera	64.68	2.00e-136	479.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence