iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099414

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000341

Gene Name

POPTRDRAFT_559352; POPTR_0005s21210g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s21210	POPTR_0005s21210.1	POPTR_0005s21210.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.40e-29	103.0	10	82

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           vp+ f+CpIsl++M+ Pv l++G++ydrssI+ wl+sg+ tcP t+q l+++d+vPnltlrrli+ w ++nss
   Q: 10   VPSLFHCPISLDVMNSPVSLCTGVSYDRSSIQHWLDSGHDTCPATMQVLSSKDFVPNLTLRRLINLWTSSNSS 82
           89*******************************************************************9986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGRDELCITV PSLFHCPISL DVMNSPVSLC TGVSYDRSSI QHWLDSGHDT CPATMQVLSS 60
KDFVPNLTLR RLINLWTSSN SSPSTADLEE KVMAWIEEIN NAKPERCLDS IVEFASRGEV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGAGAG ACGAACTCTG CATAACCGTA CCCAGTCTTT TTCACTGTCC GATTTCTCTC 60
GACGTAATGA ACTCTCCCGT GAGTCTCTGC ACCGGCGTCT CATACGATCG CTCCAGTATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0005s21210g

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence