iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114578

UUCD1 version

UUC-SoB-00836

Ensembl Protein ID

Sb04g031430.1

UniProt Accession

A0A194YS34; A0A194YS34_SORBI

Genbank Protein ID

KXG30986.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G277300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g031430	Sb04g031430.1	Sb04g031430.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.70e-08	35.6	151	193

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  + ++++lp C H+fha C+ +w       +++ +CPlCr
   Q: 151  CAVCLSPFspDAELRLLPaCRHAFHAACVDAW------LRTTPSCPLCR 193
           ********99667*******************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDALPPPAAG DPFAATLPPS LPSPPPSSSS SSSFNLSPSL LIIAALLAFV VFASVSIHFL 60
LRCLSRSSSS SHRGPSPLPT TRARRASEEE SSAAAAAAEV GSTRRSAAAV GPEEAHAAEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGCCC TCCCGCCGCC GGCCGCCGGC GACCCGTTCG CGGCCACACT CCCGCCCTCA 60
TTGCCGTCGC CGCCGCCCTC GTCTTCGTCG TCGTCGTCGT TCAACCTCTC CCCCTCGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005918	Arabidopsis lyrata	36.62	1.00e-26	112.00
IUUC-Ath-007239	Arabidopsis thaliana	35.75	2.00e-25	108.00
IUUC-Bdi-014533	Brachypodium distachyon	73.78	3.00e-72	264.00
IUUC-Bol-015819	Brassica oleracea	35.85	5.00e-28	117.00
IUUC-Bra-017550	Brassica rapa	37.09	5.00e-27	114.00
IUUC-Gma-043797	Glycine max	36.82	2.00e-22	98.60
IUUC-Hvu-047273	Hordeum vulgare	61.84	9.00e-43	166.00
IUUC-Lpe-050711	Leersia perrieri	59.22	3.00e-58	218.00
IUUC-Mtr-058303	Medicago truncatula	39.39	3.00e-30	124.00
IUUC-Mac-065570	Musa acuminata	48.51	1.00e-25	109.00
IUUC-Oba-075944	Oryza barthii	49.81	1.00e-42	165.00
IUUC-Obr-076640	Oryza brachyantha	52.31	9.00e-46	176.00
IUUC-Ogl-077705	Oryza glaberrima	64.17	4.00e-66	244.00
IUUC-Ogu-078864	Oryza glumaepatula	64.44	1.00e-66	245.00
IUUC-Oin-079511	Oryza indica	71.13	1.00e-65	242.00
IUUC-Ome-081312	Oryza meridionalis	64.17	4.00e-66	244.00
IUUC-Oni-082796	Oryza nivara	64.17	4.00e-66	244.00
IUUC-Opu-083307	Oryza punctata	65.65	9.00e-71	259.00
IUUC-Oru-084702	Oryza rufipogon	64.17	4.00e-66	244.00
IUUC-Osa-085669	Oryza sativa	51.49	4.00e-50	191.00
IUUC-Pop-100094	Populus trichocarpa	40.69	2.00e-29	121.00
IUUC-Ppe-101209	Prunus persica	34.69	3.00e-24	104.00
IUUC-Sit-110129	Setaria italica	49.66	2.00e-39	155.00
IUUC-Sly-111858	Solanum lycopersicum	40.80	5.00e-31	127.00
IUUC-Stu-112105	Solanum tuberosum	40.00	3.00e-30	124.00
IUUC-Tca-120922	Theobroma cacao	38.50	5.00e-28	117.00
IUUC-Tae-124222	Triticum aestivum	74.20	3.00e-66	244.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence