iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111534

Ensembl Protein ID

Solyc04g007640.2.1

UniProt Accession

K4BNS1; K4BNS1_SOLLC

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc04g007640.2	Solyc04g007640.2.1	Solyc04g007640.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.50e-32	111.0	268	340

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +pee+lCpIslelMrdPv++++G+ty+rs I++w++ g++ cP+t+q l++ +l+Pn++lr+li++wc++n++
   Q: 268  IPEEYLCPISLELMRDPVIVATGQTYERSFIQRWIDGGNTRCPKTQQILQDLTLTPNIALRSLISDWCAKNNV 340
           79*******************************************************************9986 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MAGGELIAVA GDSTKIPLQV VHDVCRISGA GFAGFFKKDC TDLARRVSLL AYLLEEIRDS 60
NTHLGSSSSS HDSCLYDLSI ALKAAKRLLL AANDFDPKIS ADAERKKIVF QFQCVTWKLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAGTTGTTG CATTGTGGTT GTATAGATAG CGGAATCCAA CTTCACTATC TCCACCAACC 60
ACCACCATGG CCGGCGGAGA ACTCATTGCC GTCGCCGGCG ACTCTACCAA AATCCCTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sly:101251973

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000977	Aegilops tauschii	54.63	8.00e-157	546.00
IUUC-Aly-005733	Arabidopsis lyrata	58.05	0.00e+00	629.00
IUUC-Ath-007555	Arabidopsis thaliana	58.36	0.00e+00	647.00
IUUC-Bdi-014341	Brachypodium distachyon	52.81	5.00e-161	560.00
IUUC-Bol-015936	Brassica oleracea	58.83	0.00e+00	662.00
IUUC-Bra-016825	Brassica rapa	60.13	0.00e+00	674.00
IUUC-Cel-018336	Caenorhabditis elegans	31.11	9.00e-09	55.80
IUUC-Gma-044210	Glycine max	63.57	0.00e+00	766.00
IUUC-Lpe-051513	Leersia perrieri	51.76	1.00e-157	549.00
IUUC-Mtr-058156	Medicago truncatula	64.61	0.00e+00	747.00
IUUC-Mac-065650	Musa acuminata	48.88	1.00e-147	516.00
IUUC-Oba-075045	Oryza barthii	51.67	1.00e-155	542.00
IUUC-Obr-076820	Oryza brachyantha	59.78	1.00e-144	504.00
IUUC-Ogl-077779	Oryza glaberrima	52.24	1.00e-157	549.00
IUUC-Ogu-078572	Oryza glumaepatula	52.40	3.00e-158	551.00
IUUC-Oin-079487	Oryza indica	52.24	1.00e-157	549.00
IUUC-Olo-080348	Oryza longistaminata	54.94	1.00e-154	538.00
IUUC-Ome-081282	Oryza meridionalis	52.72	5.00e-158	550.00
IUUC-Oni-083061	Oryza nivara	52.24	1.00e-157	549.00
IUUC-Opu-083297	Oryza punctata	52.24	2.00e-149	521.00
IUUC-Oru-084442	Oryza rufipogon	52.24	1.00e-157	549.00
IUUC-Osa-085919	Oryza sativa	52.24	1.00e-157	549.00
IUUC-Pop-099289	Populus trichocarpa	63.09	0.00e+00	737.00
IUUC-Ppe-101146	Prunus persica	62.33	0.00e+00	723.00
IUUC-Sit-110422	Setaria italica	55.87	1.00e-153	535.00
IUUC-Stu-112138	Solanum tuberosum	97.06	0.00e+00	1185.00
IUUC-Sbi-114533	Sorghum bicolor	55.99	5.00e-157	547.00
IUUC-Tca-121496	Theobroma cacao	64.13	0.00e+00	776.00
IUUC-Tae-125340	Triticum aestivum	54.42	9.00e-158	549.00
IUUC-Tur-126634	Triticum urartu	53.56	6.00e-142	496.00
IUUC-Vvi-131185	Vitis vinifera	67.38	0.00e+00	825.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence