iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112138

Ensembl Protein ID

PGSC0003DMT400015349

UniProt Accession

M1A5W2; M1A5W2_SOLTU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400005987	PGSC0003DMT400015349	PGSC0003DMT400015349

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.90e-32	111.1	268	340

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +pee+lCpIslelMrdPv++++G+ty+rs I++w++ g++ cP+t+q l++ +l+Pn++lr+li++wc++n++
   Q: 268  IPEEYLCPISLELMRDPVIVATGQTYERSFIQRWIDGGNTRCPKTQQILQDLTLTPNIALRSLISDWCAKNNV 340
           79*******************************************************************9986 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MAGGEPTAVA GDSTKIPLQV VHDVCRISGA GFAGFFKKDC TDLARRVSLL AYLLEEIRDS 60
NTHLGSSSSS HDSCLYDLSI ALKAAKRLLL AANDFDPKIS ADVERKKIVF QFQCVTWKLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAAACCCCA TTGGTACCAC ATAGTTGTTG CATTGTGGTT GTATAGATAC CGGAATCCAA 60
CTCAACTATC TCCACGAACC ACCACCATGG CCGGCGGAGA ACCCACCGCT GTCGCCGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sot:102580806

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000977	Aegilops tauschii	54.80	1.00e-159	555.00
IUUC-Aly-005733	Arabidopsis lyrata	60.69	0.00e+00	636.00
IUUC-Ath-007555	Arabidopsis thaliana	59.28	0.00e+00	652.00
IUUC-Bdi-014341	Brachypodium distachyon	53.43	2.00e-164	571.00
IUUC-Bol-015936	Brassica oleracea	59.81	0.00e+00	675.00
IUUC-Bra-016825	Brassica rapa	60.94	0.00e+00	682.00
IUUC-Gma-044210	Glycine max	64.21	0.00e+00	773.00
IUUC-Lpe-051513	Leersia perrieri	52.40	1.00e-160	558.00
IUUC-Mtr-058156	Medicago truncatula	65.26	0.00e+00	758.00
IUUC-Mac-065650	Musa acuminata	49.76	6.00e-152	530.00
IUUC-Oba-075045	Oryza barthii	51.03	5.00e-158	550.00
IUUC-Obr-076820	Oryza brachyantha	63.38	6.00e-147	512.00
IUUC-Ogl-077779	Oryza glaberrima	51.59	2.00e-160	557.00
IUUC-Ogu-078572	Oryza glumaepatula	51.75	7.00e-161	559.00
IUUC-Oin-079487	Oryza indica	51.59	2.00e-160	558.00
IUUC-Olo-080348	Oryza longistaminata	54.41	6.00e-157	546.00
IUUC-Ome-081282	Oryza meridionalis	52.49	4.00e-160	556.00
IUUC-Oni-083061	Oryza nivara	51.59	2.00e-160	558.00
IUUC-Opu-083297	Oryza punctata	51.75	1.00e-151	528.00
IUUC-Oru-084442	Oryza rufipogon	51.59	2.00e-160	557.00
IUUC-Osa-085919	Oryza sativa	51.59	2.00e-160	557.00
IUUC-Pop-099289	Populus trichocarpa	64.15	0.00e+00	751.00
IUUC-Ppe-101146	Prunus persica	63.42	0.00e+00	737.00
IUUC-Sit-110422	Setaria italica	56.60	2.00e-156	544.00
IUUC-Sly-111534	Solanum lycopersicum	97.06	0.00e+00	1148.00
IUUC-Sbi-114533	Sorghum bicolor	57.14	6.00e-160	556.00
IUUC-Ssc-116061	Sus scrofa	26.67	7.00e-12	65.90
IUUC-Tca-121496	Theobroma cacao	64.57	0.00e+00	782.00
IUUC-Tae-125340	Triticum aestivum	54.59	2.00e-160	558.00
IUUC-Tur-126634	Triticum urartu	53.74	2.00e-144	504.00
IUUC-Ttr-128612	Tursiops truncatus	26.36	1.00e-12	68.20
IUUC-Vvi-131185	Vitis vinifera	69.81	0.00e+00	830.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence